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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol
Any Predictor:cytosol, nucleus
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX75198 Canola cytosol 96.33 95.49
AT4G31820.1 Thale cress cytosol 87.94 88.09
GSMUA_Achr4P01950_001 Banana cytosol 42.66 59.8
VIT_04s0008g06630.t01 Wine grape cytosol 59.79 55.16
PGSC0003DMT400022573 Potato cytosol 59.27 55.12
KRH05372 Soybean cytosol 59.27 55.03
Solyc08g006870.2.1 Tomato cytosol 58.92 54.8
KRH15648 Soybean cytosol 58.74 54.63
KRH52322 Soybean cytosol 56.64 53.03
GSMUA_Achr3P04740_001 Banana cytosol 54.37 52.71
KRH61660 Soybean cytosol 55.42 50.24
EER98911 Sorghum cytosol 53.15 49.11
Os09t0420900-01 Rice cytosol 52.97 49.03
EER89339 Sorghum cytosol 52.97 47.72
Zm00001d005769_P001 Maize cytosol 51.57 47.2
Zm00001d045098_P001 Maize cytosol 52.45 47.1
Os06t0184500-00 Rice cytosol 52.62 46.74
HORVU5Hr1G064620.1 Barley cytosol 51.75 46.47
TraesCS5D01G231300.1 Wheat cytosol 51.75 46.47
CDX81314 Canola cytosol 42.66 46.39
TraesCS5B01G222700.2 Wheat cytosol 51.4 46.15
Zm00001d020512_P001 Maize cytosol 52.27 46.07
CDY18660 Canola cytosol 42.48 46.02
CDX89539 Canola cytosol 38.29 45.72
TraesCS7D01G150700.2 Wheat cytosol 51.92 45.41
TraesCS7A01G149100.1 Wheat cytosol 51.75 45.19
TraesCS7B01G052800.1 Wheat cytosol 51.4 45.02
CDY38923 Canola cytosol 37.41 44.96
CDY69095 Canola cytosol 44.06 44.92
TraesCS5A01G223800.1 Wheat cytosol 51.75 44.65
CDY12846 Canola cytosol 42.66 43.19
HORVU7Hr1G030460.8 Barley cytosol 48.78 42.27
CDX81462 Canola cytosol 44.41 42.12
CDY37223 Canola cytosol 44.06 41.79
CDY44035 Canola cytosol 41.61 41.39
CDY72257 Canola cytosol 36.54 41.3
CDY72267 Canola cytosol 36.54 41.3
CDX72639 Canola cytosol 41.43 41.0
CDY22422 Canola cytosol 40.91 40.7
CDY29566 Canola cytosol 41.08 40.66
CDY50369 Canola cytosol 35.84 39.96
CDX83620 Canola cytosol 36.01 37.66
HORVU7Hr1G097110.6 Barley cytosol 35.66 37.64
CDY13635 Canola cytosol 36.54 36.41
HORVU1Hr1G034650.1 Barley plasma membrane, vacuole 40.38 35.59
CDY68489 Canola cytosol, plastid 27.1 34.52
CDY10395 Canola cytosol 31.47 33.15
CDY17704 Canola cytosol 32.34 32.98
CDX70320 Canola cytosol 32.87 32.87
CDX77798 Canola cytosol 32.17 32.8
CDX80858 Canola cytosol 32.87 31.97
CDY11245 Canola cytosol 32.87 31.44
CDY72506 Canola cytosol 6.82 30.71
CDY37857 Canola cytosol 31.47 30.0
CDX85639 Canola cytosol 29.9 29.9
CDX90249 Canola cytosol, mitochondrion, nucleus 32.87 29.79
CDY12841 Canola cytosol 30.94 29.35
CDY57436 Canola cytosol 30.77 29.19
CDX84827 Canola cytosol 28.67 29.03
CDX69627 Canola cytosol 30.77 29.0
CDY09812 Canola cytosol 30.77 28.95
CDY57361 Canola cytosol 25.0 28.66
CDY30615 Canola cytosol 25.0 28.66
CDX73781 Canola cytosol 27.27 28.62
CDY02075 Canola cytosol 28.85 28.45
CDY10743 Canola cytosol 28.85 28.4
CDY23992 Canola cytosol 27.97 28.32
CDY27653 Canola cytosol 30.59 28.32
CDY18715 Canola cytosol 35.84 28.31
CDX84515 Canola cytosol 35.84 28.24
CDX85365 Canola cytosol 30.42 28.06
CDX86278 Canola cytosol 30.42 28.06
CDY09586 Canola cytosol 32.17 28.05
CDY37449 Canola cytosol 23.78 27.98
CDX89922 Canola cytosol 30.77 27.94
CDY45241 Canola cytosol 29.2 27.93
CDX77951 Canola cytosol 26.75 27.92
CDY09561 Canola cytosol 29.37 27.81
CDX81221 Canola cytosol 35.49 27.81
CDY18140 Canola cytosol 30.59 27.78
CDY02293 Canola cytosol, mitochondrion, nucleus 31.99 27.77
CDY02305 Canola cytosol 29.37 27.68
CDY32492 Canola cytosol 30.24 27.12
CDX73937 Canola plastid 27.62 27.05
CDX99692 Canola cytosol, mitochondrion, nucleus 30.24 26.82
CDY30765 Canola cytosol 29.72 26.81
CDY00659 Canola plastid 27.27 26.67
CDX96986 Canola cytosol 29.02 26.52
CDX69851 Canola cytosol 28.67 26.03
CDY52208 Canola plastid 29.2 25.85
CDX83030 Canola plastid 23.6 25.23
CDY29723 Canola cytosol 29.2 23.96
CDY20341 Canola cytosol 29.02 23.38
CDY12056 Canola plasma membrane 33.04 11.71
Protein Annotations
Gene3D:3.30.710.10MapMan:35.1GO:A0A078BVH2InterPro:BTB/POZ_NPY1InterPro:BTB/POZ_domEnsemblPlants:CDX68790
ProteinID:CDX68790ProteinID:CDX68790.1GO:GO:0003674GO:GO:0005488GO:GO:0005515GO:GO:0006810
GO:GO:0007275GO:GO:0008150GO:GO:0048513GO:GO:0060918GO:GO:0099402EnsemblPlantsGene:GSBRNA2T00130502001
InterPro:IPR000210InterPro:IPR027356InterPro:NPH3_domPFAM:PF00651PFAM:PF03000PFscan:PS50097
PFscan:PS51649PANTHER:PTHR32370PANTHER:PTHR32370:SF7InterPro:SKP1/BTB/POZ_sfSUPFAM:SSF54695UniPathway:UPA00143
UniParc:UPI0004EDB379SEG:seg::::
Description
BnaC01g06630D
Coordinates
chrLK031789:-:1277690..1281031
Molecular Weight (calculated)
63979.5 Da
IEP (calculated)
8.077
GRAVY (calculated)
-0.291
Length
572 amino acids
Sequence
(BLAST)
001: MKFMKLGSKP DTFESDDKFH KYAVSDLDSD VTVIVGEFTF YLHKFPLLSK SNRMQRLVSE ASEENTNDIT ISDIPGGHKA FEICAKFCYG ITVTLNAYNI
101: TAVRCAAEYL EMTEDVDRGN LIYKIEVFLN SGIFRSWKDS IIMLQTTKSL LPWSEDLKLV ARCIDSVSAK ILVNPETITW SYTHNRKLSG PDKIVERDEN
201: AIPKDWWVED VCELEIDLFK KVLRAVKSSG RMNNGVISET LRYYVARWLP ESIESEAASS NKHLVETVVS LLPRVNRAMS YSTCSFLLKL LKVSFLVGVD
301: ETVKEDLVDN VSLKLHEASV KDLLIHEVEL VHRIVDRFVG DEKRVSEDDR YKEFVLGNGV LLSVGRLIDA YLASNRDLTL SSFVELSELI PEAARPIHDG
401: LYKAIDTFLK EHPELTKSEK KRLCGLMDVR KLTSEASAHA AQNERLPLRV VVQVLYFEQL RANHSPVGSV AASSHSPIPP VKKAEESIVV VDEEAAKKVG
501: LSKKSRGSKS TRSGGGAGGP QLMPSRSRRI FEKIWPGKGE SNKSSEVSSG SSQSPQAKSS SSSSRRRRHS IS
Best Arabidopsis Sequence Match ( AT4G31820.1 )
(BLAST)
001: MKFMKLGSKP DTFESDGKFV KYAVSDLDSD VTIHVGEVTF HLHKFPLLSK SNRMQRLVFE ASEEKTDEIT ILDMPGGYKA FEICAKFCYG MTVTLNAYNI
101: TAVRCAAEYL EMTEDADRGN LIYKIEVFLN SGIFRSWKDS IIVLQTTRSL LPWSEDLKLV GRCIDSVSAK ILVNPETITW SYTFNRKLSG PDKIVEYHRE
201: KREENVIPKD WWVEDVCELE IDMFKRVISV VKSSGRMNNG VIAEALRYYV ARWLPESMES LTSEASSNKD LVETVVFLLP KVNRAMSYSS CSFLLKLLKV
301: SILVGADETV REDLVENVSL KLHEASVKDL LIHEVELVHR IVDQFMADEK RVSEDDRYKE FVLGNGILLS VGRLIDAYLA LNSELTLSSF VELSELVPES
401: ARPIHDGLYK AIDTFMKEHP ELTKSEKKRL CGLMDVRKLT NEASTHAAQN ERLPLRVVVQ VLYFEQLRAN HSPVASVAAS SHSPVEKTEE NKGEEATKKV
501: ELSKKSRGSK STRSGGGAQL MPSRSRRIFE KIWPGKGEIS NKSSEVSSGS SQSPPAKSSS SSSRRRRHSI S
Arabidopsis Description
NPY1BTB/POZ domain-containing protein NPY1 [Source:UniProtKB/Swiss-Prot;Acc:Q8H1D3]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.