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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • mitochondrion 1
  • cytosol 2
  • plastid 3
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, plastid
iPSORT:mitochondrion
MultiLoc:cytosol
PProwler:plastid
TargetP:plastid
WoLF PSORT:plastid
YLoc:cytosol
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS2A01G197100.1
TraesCS2B01G224600.1
TraesCS2D01G205000.1
TraesCS4A01G275400.1
TraesCS4B01G038900.1
TraesCS4D01G035800.1

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G66560.1 TraesCS2A01G197100.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS2B01G224600.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS2D01G205000.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS4A01G275400.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS4B01G038900.1 AT1G03140.1 21798944
AT5G66560.1 TraesCS4D01G035800.1 AT1G03140.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G389200.2 Wheat cytosol, plastid 94.62 95.21
HORVU5Hr1G093880.1 Barley cytosol 59.75 93.51
TraesCS5B01G383100.1 Wheat plastid 93.86 93.43
HORVU5Hr1G093850.15 Barley mitochondrion 89.86 89.18
TraesCS1B01G298700.1 Wheat cytosol, plastid 56.07 88.16
TraesCS2D01G507400.1 Wheat nucleus 74.35 88.0
Zm00001d033941_P001 Maize mitochondrion, plastid 76.34 78.76
OQU91026 Sorghum cytosol, nucleus, plastid 72.2 78.6
Os03t0738900-00 Rice nucleus, plasma membrane, plastid 77.57 76.98
VIT_00s0207g00230.t01 Wine grape cytosol 50.84 52.13
GSMUA_Achr8P04840_001 Banana cytosol 47.0 52.04
CDY45241 Canola cytosol 45.31 49.33
Solyc02g090070.2.1 Tomato nucleus 49.16 49.16
TraesCS5A01G403400.1 Wheat cytosol 50.38 48.52
KRH28552 Soybean cytosol 44.09 48.48
PGSC0003DMT400026008 Potato cytosol 48.85 48.25
KRH08351 Soybean cytosol 47.93 48.15
CDY30765 Canola cytosol 45.78 47.0
CDX73781 Canola cytosol 38.86 46.42
CDX77951 Canola cytosol 39.02 46.35
AT5G66560.1 Thale cress cytosol 46.85 45.66
KRH76914 Soybean cytosol 35.64 45.49
KRH69999 Soybean endoplasmic reticulum 47.47 45.44
AT3G50840.1 Thale cress cytosol 39.63 45.34
Bra012082.1-P Field mustard cytosol 46.39 45.14
Bra036858.1-P Field mustard cytosol 39.48 44.77
TraesCS5A01G042600.1 Wheat cytosol 39.17 40.28
TraesCS5A01G375500.3 Wheat peroxisome 38.86 39.29
TraesCS7A01G309700.1 Wheat cytosol 38.4 38.88
TraesCS3A01G317300.1 Wheat cytosol 34.72 34.82
TraesCS2A01G526900.1 Wheat cytosol 33.95 33.9
TraesCS5A01G146300.1 Wheat plastid 30.57 31.59
TraesCS4A01G049300.1 Wheat cytosol 29.03 31.09
TraesCS4A01G192900.1 Wheat cytosol 26.27 30.43
TraesCS7A01G184200.2 Wheat plastid 31.03 30.24
TraesCS6A01G208800.2 Wheat cytosol 28.57 29.67
TraesCS5A01G070700.1 Wheat cytosol 27.34 28.62
TraesCS7A01G149100.1 Wheat cytosol 28.73 28.55
TraesCS6A01G085100.1 Wheat cytosol 31.95 28.45
TraesCS4A01G236100.1 Wheat cytosol 27.19 27.92
TraesCS4A01G048200.1 Wheat cytosol 25.96 27.89
TraesCS5A01G171100.1 Wheat cytosol 22.89 25.96
TraesCS5A01G223800.1 Wheat cytosol 25.5 25.04
GSMUA_Achr3P25690_001 Banana nucleus 43.63 23.79
Protein Annotations
EnsemblPlants:TraesCS5A01G379300.1EnsemblPlantsGene:TraesCS5A01G379300GO:GO:0003674GO:GO:0005488GO:GO:0005515InterPro:BTB/POZ_dom
InterPro:IPR000210InterPro:IPR027356InterPro:NPH3_domInterPro:SKP1/BTB/POZ_sfncoils:CoilPANTHER:PTHR32370
PANTHER:PTHR32370:SF78PFAM:PF03000PFscan:PS51649SEG:segSMART:SM00225SUPFAM:SSF54695
MapMan:35.1:::::
Description
No Description!
Coordinates
chr5A:+:576582737..576585018
Molecular Weight (calculated)
71279.9 Da
IEP (calculated)
5.587
GRAVY (calculated)
-0.397
Length
651 amino acids
Sequence
(BLAST)
001: MSSSSAARHG PSRAGEAWFC TTGLPSDVVF EVQDMSFHLH KFPLMSKSRK ISRMLAEQDE QRRPRRGSSG GNAEEHAAAE TEIEEAEEEE EEEEEDDGDE
101: QQPQQVRMDD GKSYRITFPD FPGGPGTFET ATKFCYGVRV ELTPWNVAPL RCAAEYLEMT EEHFEDNLAA RAEAYLSQSV LRHPGEATKA LKSCEDLLPH
201: AEDLGIVARC VDAIAARSSA TSRSWFGDLT VLGLHMYKRV MAAMAAREDV RTDALEGCLV SYAKATLPGL SRSMRWRRAS APVSSEVEQR DLLEAVVASL
301: PTDKGSGSVV TAKFLFALLR TAHILRASDA ARAAIERKAA TQLEQATVED VLIPSYSGAA ETLYDVDCVE RVVRHFLAEE EVGEDEASSS AAITEEEAAA
401: RTTASRPSAV AMVQVGKLVD NYLAEVASDA NLKPAKFCEL ALAMPDHARI YDDGVYRAVD IYLKAHPRLT AEERDRVCGV VDCRKLTVEA CTHAAQNERL
501: PLRAVLQVLF FEQLQLRRAI SGTLLASTAS PRARHPNPQP QRPAAVALRH AAGPSEAWRT TTVQESQTLR VDMDGMRTRV QGLERECSSM RRAIKKIDGR
601: SGAASPGSAS PDAAAPAGWR SRYRCKFSTQ VCDSQARDAV VSRASRMGMS P
Best Arabidopsis Sequence Match ( AT5G66560.1 )
(BLAST)
001: MASEKSTSKG QAWFCTTGLP SDIEIEVDDM TFHLHKFPLM SKSRKLHRLI TEQETRSSSS MALITVIDPK VEETDKKGKG HEIEDDKEEE EVEEQEIEEN
101: GYPHIKLEDF PGSSESFEMV AKFCYGVKMD LSASTVVPLR CAAEHLEMTE EYSPDNLISK TERFLSHSVY KSLRESIKAL KACESVSPLA GSLGITEQCI
201: DSIVSRASSA DPSLFGWPVN DGGGRGNISA TDLQLIPGGA AKSRKKPSRD SNMELWFEDL TQLSLPIFKT VILSMRSGDL SSDIIESCLI CYAKKHIPGI
301: LRSNRKPPSS SSTAVSENEQ RELLETITSN LPLDKSSISS TTRFLFGLLR TAIILNAAEI CRDLLERKIG SQLERATLDD LLVPSYSYLN ETLYDVDLVE
401: RILGHFLDTL EQSNTAIVEV DGKSPSLMLV GKLIDGFLAE IASDANLKSD KFYNLAISLP DQARLYDDGL YRAVDVYLKA HPWVSEAERE KICGVMDCQK
501: LTLEACTHAA QNERLPLRAV VQVLFFEQLQ LRHAIAGTLL AAQSPSTSQS TEPRPSAAIR NLTITEEDGD EAEGERQVDA GKWKKTVREN QVLRLDMDTM
601: RTRVHRLERE CSNMKKVIAK IDKEGSSPAT TTDRPRSWSI TKKFGCKFKT QVCDSHEATM VDHRSRRS
Arabidopsis Description
BTB/POZ domain-containing protein At5g66560 [Source:UniProtKB/Swiss-Prot;Acc:Q94A73]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.