Factsheet for TraesCS4A01G236100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G078900.3	Wheat	cytosol	98.27	98.27
TraesCS4D01G077700.3	Wheat	cytosol	98.11	98.11
EER91236	Sorghum	cytosol	83.91	84.04
Os03t0609800-02	Rice	cytosol	82.18	82.18
Zm00001d013741_P001	Maize	cytosol	82.49	81.34
Zm00001d033344_P001	Maize	cytosol	80.91	80.79
TraesCS5A01G070700.1	Wheat	cytosol	70.03	71.38
VIT_07s0129g00250.t01	Wine grape	cytosol	62.78	63.27
PGSC0003DMT400064174	Potato	cytosol	59.78	60.35
Solyc02g092480.2.1	Tomato	cytosol	59.62	60.19
GSMUA_Achr5P01710_001	Banana	cytosol	55.05	60.07
VIT_03s0091g00680.t01	Wine grape	cytosol	58.99	59.94
Solyc01g107180.2.1	Tomato	cytosol	58.2	58.95
PGSC0003DMT400066161	Potato	cytosol	58.2	58.95
KRH35678	Soybean	cytosol	57.73	58.65
KRH58085	Soybean	cytosol	57.57	58.49
KRH04439	Soybean	cytosol	57.73	58.19
CDX81314	Canola	cytosol	48.27	58.17
KRH58082	Soybean	cytosol	57.1	57.64
KRH04442	Soybean	cytosol	57.1	57.46
TraesCS4A01G048200.1	Wheat	cytosol	54.73	57.26
Bra037846.1-P	Field mustard	cytosol	47.32	57.03
PGSC0003DMT400013928	Potato	cytosol	54.73	56.89
CDY18660	Canola	cytosol	47.32	56.82
Solyc10g049660.1.1	Tomato	cytosol	54.57	56.63
CDY38923	Canola	cytosol	42.43	56.51
Bra032187.1-P	Field mustard	cytosol	42.59	56.37
AT2G23050.1	Thale cress	cytosol	42.74	56.34
PGSC0003DMT400038537	Potato	cytosol	55.52	56.14
CDY37223	Canola	cytosol	53.31	56.05
CDX81462	Canola	cytosol	53.31	56.05
KRG91101	Soybean	mitochondrion	55.2	55.56
CDX89539	Canola	cytosol	41.96	55.53
CDY50369	Canola	cytosol	44.8	55.36
Solyc03g044090.2.1	Tomato	cytosol	54.73	55.08
Bra039820.1-P	Field mustard	cytosol	54.1	54.7
CDY69095	Canola	cytosol	48.27	54.55
Bra012166.1-P	Field mustard	cytosol	48.42	54.53
GSMUA_Achr2P13430_001	Banana	cytosol	57.1	53.95
CDY12846	Canola	cytosol	47.95	53.81
AT4G37590.1	Thale cress	cytosol	48.9	53.45
AT5G67440.1	Thale cress	cytosol	48.74	53.37
Bra010603.1-P	Field mustard	cytosol	48.27	53.22
CDY44035	Canola	cytosol	47.95	52.87
CDY22422	Canola	cytosol	47.79	52.7
CDX72639	Canola	cytosol	47.95	52.6
CDY29566	Canola	cytosol	47.79	52.42
AT2G14820.2	Thale cress	cytosol	52.37	52.37
Bra017837.1-P	Field mustard	cytosol	47.63	52.25
TraesCS7A01G149100.1	Wheat	cytosol	45.11	43.66
TraesCS5A01G223800.1	Wheat	cytosol	45.43	43.44
TraesCS5A01G171100.1	Wheat	cytosol	34.07	37.63
TraesCS6A01G208800.2	Wheat	cytosol	34.23	34.61
TraesCS7A01G309700.1	Wheat	cytosol	34.7	34.21
TraesCS5A01G042600.1	Wheat	cytosol	33.75	33.81
TraesCS3A01G317300.1	Wheat	cytosol	33.91	33.13
TraesCS5A01G375500.3	Wheat	peroxisome	32.65	32.14
TraesCS6A01G085100.1	Wheat	cytosol	36.28	31.46
TraesCS2A01G526900.1	Wheat	cytosol	31.07	30.21
TraesCS4A01G049300.1	Wheat	cytosol	27.29	28.45
TraesCS5A01G146300.1	Wheat	plastid	28.23	28.41
TraesCS5A01G379300.1	Wheat	cytosol, plastid	27.92	27.19
TraesCS5A01G403400.1	Wheat	cytosol	28.71	26.92
TraesCS7A01G184200.2	Wheat	plastid	27.6	26.2
TraesCS4A01G192900.1	Wheat	cytosol	22.4	25.27

Protein Annotations

Gene3D:3.30.710.10	MapMan:35.1	InterPro:BTB/POZ_NPY2	InterPro:BTB/POZ_dom	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0008150	GO:GO:0009605	GO:GO:0009606	GO:GO:0009628	GO:GO:0009958
InterPro:IPR000210	InterPro:IPR027356	InterPro:NPH3_dom	PFAM:PF00651	PFAM:PF03000	PFscan:PS50097
PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF4	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695	EnsemblPlantsGene:TraesCS4A01G236100
EnsemblPlants:TraesCS4A01G236100.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr4A:+:544887198..544891670

Molecular Weight (calculated)

69896.1 Da

IEP (calculated)

5.850

GRAVY (calculated)

-0.260

Length

634 amino acids

Sequence
(BLAST)

001: MKHMKLGSKP DVFQTEGSNI RFVATELATD IVISIGDVKF YLHKFPLLSK SSRLQRLVAS SNEESDDEVN ISDIPGGSSA FEICAKFCYG MIVTLNAYNV
101: LAARCAAEYL EMFETIDKGN LIYKIDVFLT SSIFRTWKDS IIVLQSTKSL LPWSENLKVI NHCIDSIASK ASIDPSEVEW SYTYNRKKLQ SENGVDSHWN
201: GVRMQQMVPK DWWVEDLSEL EMDLYKRVLL TIKAKGRTPA VVIGEALRVY AFRRLFGSLE DAVSNGIDCT KRRAVLESIV FLLPTEKGSV SCGFLLKLLN
301: AACLLESGES YRDNLVKRIG TQLDGASVPD LLIPATSAEN GVYNVDVIMA IVEQFMSHHS DNGKMTFQDD DEIVEVEKFA SVSSTSKLAV AKLIDEYLGE
401: IAKDPNLPVL KFIALAEMVS ASSRQMHDEL YHAIDMYLKE HPSLSKSEKK RLCGLMDCKK LSQEACMHAV QNERLPLRVV VQVLFFEQVR ASDASARSDS
501: GADLSSAVHS LLPRENGNSY GSSRSAATTT TEEEGSGVPT SSDINSFRSM RLANNCGGSE RSSTSSDINK NGEDKSTTTG KAKVMLMPKM LSKLWSGKAH
601: VGENSSSDTS ESPGSANPEE VKSTPSRNTR QSTS

Best Arabidopsis Sequence Match ( AT2G14820.1 )
(BLAST)

001: MKFMKIGSKL DSFKTDGNNV RYVENELASD ISVDVEGSRF CLHKFPLLSK CACLQKLLSS TDKNNIDDID ISGIPGGPTA FETCAKFCYG MTVTLSAYNV
101: VATRCAAEYL GMHETVEKGN LIYKIDVFLS SSLFRSWKDS IIVLQTTKPF LPLSEDLKLV SLCIDAIATK ACVDVSHVEW SYTYNKKKLA EENNGADSIK
201: ARDVPHDWWV EDLCELEIDY YKRVIMNIKT KCILGGEVIG EALKAYGYRR LSGFNKGVME QGDLVKHKTI IETLVWLLPA EKNSVSCGFL LKLLKAVTMV
301: NSGEVVKEQL VRRIGQQLEE ASMAELLIKS HQGSETLYDV DLVQKIVMEF MRRDKNSEIE VQDDEDGFEV QEVRKLPGIL SEASKLMVAK VIDSYLTEIA
401: KDPNLPASKF IDVAESVTSI PRPAHDALYR AIDMFLKEHP GITKGEKKRM CKLMDCRKLS VEACMHAVQN DRLPLRVVVQ VLFFEQVRAA ASSGSSTPDL
501: PRGMGRELRS CGTYGSSRSV PTVMEDEWEA VATEEEMRAL KSEIAALKLQ EESGRKSMDR AGVTAISKIR SLIMSKKIFG KKVQLQSKGG GEKNNGGGGG
601: GSDSSESLGS MNAAEETAKT ATPSRNLTRR VSVS

Arabidopsis Description

NPY2BTB/POZ domain-containing protein NPY2 [Source:UniProtKB/Swiss-Prot;Acc:O80970]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.