CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH43181	Soybean	cytosol	96.19	96.81
VIT_00s1395g00010.t01	Wine grape	cytosol	50.95	68.74
VIT_00s0665g00050.t01	Wine grape	cytosol	54.6	68.66
AT5G10250.2	Thale cress	cytosol	55.4	56.11
PGSC0003DMT400018688	Potato	cytosol	55.56	55.91
CDX69851	Canola	cytosol	55.87	55.87
Bra009047.1-P	Field mustard	cytosol	55.71	55.71
Solyc05g051580.2.1	Tomato	cytosol	54.92	55.45
CDX96986	Canola	cytosol	54.13	54.47
KRH42114	Soybean	cytosol	45.4	42.56
KRH10586	Soybean	cytosol	45.08	42.26
KRH21782	Soybean	cytosol	45.08	41.95
KRH23618	Soybean	cytosol	33.65	41.9
KRH49804	Soybean	endoplasmic reticulum, nucleus, plasma membrane, plastid	44.6	37.62
KRH33962	Soybean	cytosol	28.89	32.21
KRG92834	Soybean	cytosol	28.89	32.21
KRH28552	Soybean	cytosol	30.0	31.93
KRH04469	Soybean	cytosol	29.52	31.9
KRH19874	Soybean	cytosol	29.52	31.58
KRH21111	Soybean	cytosol	30.32	31.26
KRH32482	Soybean	cytosol	29.21	31.24
KRH58066	Soybean	cytosol	29.21	31.19
KRH74516	Soybean	cytosol	30.32	31.06
KRH12771	Soybean	cytosol	31.59	30.95
KRH58085	Soybean	cytosol	30.16	30.45
KRH08351	Soybean	cytosol	31.27	30.4
KRH04439	Soybean	cytosol	30.32	30.37
KRH04442	Soybean	cytosol	30.32	30.32
KRH28386	Soybean	cytosol	30.32	30.32
KRH45579	Soybean	nucleus	30.48	30.28
KRH77099	Soybean	cytosol	29.68	30.26
KRH69640	Soybean	cytosol	30.48	30.19
KRH37734	Soybean	cytosol	30.79	30.17
KRH58082	Soybean	cytosol	30.0	30.1
KRG99441	Soybean	cytosol	29.84	29.75
KRH01932	Soybean	cytosol	27.62	29.74
KRH76914	Soybean	cytosol	23.97	29.61
KRH00498	Soybean	cytosol, plastid	28.41	29.44
KRH40661	Soybean	plastid	28.41	29.44
KRH15648	Soybean	cytosol	28.73	29.43
KRH05372	Soybean	cytosol	28.73	29.38
KRH35678	Soybean	cytosol	29.05	29.33
KRG96392	Soybean	plastid	29.21	29.3
KRH52322	Soybean	cytosol	28.41	29.3
KRH34860	Soybean	cytosol	28.73	29.29
KRH17211	Soybean	cytosol	26.83	29.19
KRG98106	Soybean	cytosol	26.51	29.14
KRH69999	Soybean	endoplasmic reticulum	31.43	29.12
KRH68133	Soybean	cytosol, plastid	29.05	29.09
KRH51214	Soybean	cytosol	27.3	29.05
KRH71541	Soybean	plastid	29.05	29.05
KRH66064	Soybean	extracellular	28.25	29.04
KRG91101	Soybean	mitochondrion	28.89	28.89
KRH36642	Soybean	cytosol	27.46	28.88
KRG91918	Soybean	cytosol	28.25	28.85
KRH11633	Soybean	cytosol	27.3	28.52
KRH31912	Soybean	cytosol	28.25	28.34
KRH72843	Soybean	cytosol	26.03	28.28
KRH30675	Soybean	cytosol	9.68	27.6
KRH22745	Soybean	cytosol	27.62	27.49
KRH26561	Soybean	cytosol	27.62	27.4
KRH61660	Soybean	cytosol	27.14	27.1
KRH30676	Soybean	plastid	12.22	27.02
KRG99570	Soybean	cytosol, endoplasmic reticulum, nucleus	28.41	26.56
KRH62777	Soybean	cytosol	12.06	24.13
KRG90163	Soybean	cytosol	17.78	23.33

Protein Annotations

EntrezGene:100799397	Gene3D:3.30.710.10	MapMan:35.1	EMBL:ACUP02003316	InterPro:BTB/POZ_dom	ncoils:Coil
EnsemblPlantsGene:GLYMA_05G178500	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	UniProt:I1K4J3	InterPro:IPR000210
InterPro:IPR027356	EnsemblPlants:KRH59336	ProteinID:KRH59336	ProteinID:KRH59336.1	InterPro:NPH3_dom	PFAM:PF03000
PFscan:PS50097	PFscan:PS51649	PANTHER:PTHR32370	PANTHER:PTHR32370:SF37	InterPro:SKP1/BTB/POZ_sf	SUPFAM:SSF54695
UniParc:UPI000294C59B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr5:+:36660418..36664622

Molecular Weight (calculated)

71724.8 Da

IEP (calculated)

6.218

GRAVY (calculated)

-0.421

Length

630 amino acids

Sequence
(BLAST)

001: MKSLQVGQAQ QDYGSHTDGS DKVSDKSILF PNKFIAIADS FKGEHSWFIA PQIPTDFSIQ VQETTYNVHK YPLISKCGYI GQLEIQPLIS NSGNVLKLEN
101: FPGGSETFET ILKFCYGLPI DFSPDNIAAL RCASEFLEMT EELEDGNLIS KSEAFLTFVV LSSWKDTITV LKSCENLSPW AENLQIVRRC CDSIAWKASK
201: DELTSEDATP NQESWWFNDV AAFRIDHFMQ IISAIRAKGT KPETIGKCII QYAKRWLPGM EVELEGLRGY GHEKCNLQFS IFSGKKKESS GHSKEQKTII
301: ESLISIIPPQ QDAVSCKFML QMLKMAMMYS VSPALTTDLE KRVSLVLEDA EVSDLLIPRY QNGDQGKTVI SMTISSEECT MLDIDVVQRI VEYFLMHEQQ
401: QIQQQQKTRK FNISRLLDNY LAEIARDPNL SITKFQVFAE FLPENTRSYD DGLYRAIDTY LKTHASLTEH DRKRLCKIMN CEKLSLDACL HAAQNERLPL
501: RTVVQILFSE QVKMRAAMHE KEPAQIGIQS EQEGNHTSAT MDIKALKAEL ENVKSQMVEL QNDYCELQQE YEKLSNKPKN SSGWSLNWRK IKNSLHTKPA
601: GVEIGDRQDA PKSPNTILRR LNPRRRLSMS

Best Arabidopsis Sequence Match ( AT5G10250.2 )
(BLAST)

001: MNSVSAAERL KSFGDAGPVC NKSIIFPSRV VTLANSFEKK DRSWYVKSQI PTDLSIQVND ITFKAHKFPL ISKCGYISSI ELKPSTSENG YHLKLENFPG
101: GADTFETILK FCYNLPLDLN PLNVAPLRCA SEYLYMTEEF EAGNLISKTE AFITFVVLAS WRDTLTVLRS CTNLSPWAEN LQIVRRCCDL LAWKACNDNN
201: IPEDVVDRNE RCLYNDIATL DIDHFMRVIT TMKARRAKPQ ITGKIIMKYA DNFLPVINDD LEGIKGYGLG KNELQFSVNR GRMEESNSLG CQEHKETIES
301: LVSVLPPQSG AVSCHFLLRM LKTSIVYSAS PALISDLEKR VGMALEDANV CDLLIPNFKN EEQQERVSSP EVYTIYNVDV VHRIFEFFLM HEQQQVLGKP
401: SISKLLDNYL AEIAKDPYLP ITKFQVLAEM LPENAWKCHD GLYRAIDMFL KTHPSLSDHD RRRLCKTMNC EKLSLDACLH AAQNDRLPLR TIVQINTQVL
501: FSEQVKMRMM MQDKLPEKEE ENSGGREDKR MSRDNEIIKT LKEELENVKK KMSELQSDYN ELQQEYERLS SKQKSSHNWG LRWQKVKKSF QTKREDEETR
601: ERTRRRSSTG QRTSFRRRMS MS

Arabidopsis Description

DOT3Phototropic-responsive NPH3 family protein [Source:TAIR;Acc:AT5G10250]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.