Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G434200.2 | Wheat | nucleus | 92.63 | 93.22 |
| TraesCS1B01G459600.2 | Wheat | plastid | 86.79 | 86.9 |
| HORVU1Hr1G092980.14 | Barley | plastid | 87.42 | 78.45 |
| Os05t0586400-01 | Rice | nucleus | 55.27 | 55.77 |
| KXG22639 | Sorghum | nucleus | 54.89 | 54.55 |
| Zm00001d009716_P001 | Maize | nucleus | 49.05 | 50.52 |
| TraesCS3A01G224200.2 | Wheat | nucleus | 44.22 | 41.73 |
| Bra037384.1-P | Field mustard | nucleus | 11.94 | 41.05 |
| CDX79176 | Canola | cytosol | 5.21 | 36.28 |
| CDX90032 | Canola | nucleus | 19.57 | 27.5 |
| CDY15177 | Canola | nucleus | 19.19 | 27.11 |
| CDY48504 | Canola | nucleus | 19.31 | 27.0 |
| CDX91876 | Canola | nucleus | 19.19 | 25.86 |
| Bra033264.1-P | Field mustard | nucleus | 19.06 | 25.82 |
| CDY67475 | Canola | nucleus | 19.19 | 25.55 |
| Bra000943.1-P | Field mustard | nucleus | 19.44 | 25.5 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 25.03 | 25.22 |
| CDY42041 | Canola | cytosol | 20.2 | 24.61 |
| CDY07174 | Canola | nucleus | 19.7 | 24.37 |
| GSMUA_Achr3P25070_001 | Banana | vacuole | 21.35 | 24.28 |
| CDX80013 | Canola | nucleus | 20.2 | 23.91 |
| Bra007625.1-P | Field mustard | cytosol | 22.36 | 23.75 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 25.41 | 23.56 |
| Bra004541.1-P | Field mustard | nucleus | 20.08 | 23.55 |
| CDX71720 | Canola | cytosol | 21.98 | 23.38 |
| CDY11374 | Canola | cytosol | 21.98 | 23.35 |
| AT4G01090.1 | Thale cress | nucleus | 20.46 | 22.55 |
| AT3G61670.1 | Thale cress | nucleus | 22.62 | 22.53 |
| AT1G01440.1 | Thale cress | nucleus | 18.68 | 22.14 |
| AT2G46380.1 | Thale cress | nucleus | 21.6 | 22.14 |
| CDY11373 | Canola | cytosol | 20.58 | 22.1 |
| TraesCS7A01G351500.1 | Wheat | nucleus | 22.87 | 21.87 |
| TraesCS7A01G336000.1 | Wheat | nucleus | 23.51 | 21.69 |
| KRH68892 | Soybean | nucleus | 23.38 | 20.35 |
| KRG97141 | Soybean | nucleus | 23.13 | 19.98 |
| KRH06502 | Soybean | nucleus | 22.62 | 19.96 |
| KRH47938 | Soybean | nucleus | 22.24 | 19.57 |
| Solyc01g095590.2.1 | Tomato | nucleus | 22.24 | 18.1 |
| Solyc08g082040.2.1 | Tomato | nucleus | 21.22 | 17.67 |
| PGSC0003DMT400032053 | Potato | nucleus | 20.97 | 17.44 |
| PGSC0003DMT400000290 | Potato | nucleus | 21.98 | 17.23 |
| KRG99688 | Soybean | cytosol | 0.76 | 8.82 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G425200.2 | EnsemblPlantsGene:TraesCS1A01G425200 | InterPro:Zinc_ribbon_12 | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF8 | PFAM:PF11331 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr1A:+:580420857..580424626
Molecular Weight (calculated)
86401.1 Da
IEP (calculated)
9.155
GRAVY (calculated)
-0.922
Length
787 amino acids
Sequence
(BLAST)
(BLAST)
001: MGSEPKEMKY RRRARAPEPG DYGQCGGADR GGAVDWAALK QQDPAELLRK LDEIRDQITR SCEAAGPRGA EPPQHRMGRG AVSMRHSHAD PLPPPPGRGA
101: PPEYYRSSRH AGRYGQGGPL SSYDQRSVCD DRYARQPSGR FRQPRPEGQW EGYGYGGHHS SCQCAQCVHA QRAMPPQEES IPMARFFAGQ QRPPYQFDRS
201: ASSISSEYDR RSVASSLYSH LSMSKRRVEY FSKRADSFCR PTKGGAPFVV CSSCNQLLQL PPGKCTSPKQ NRVQCGSCSE VVTFDFKPKG VKVHPVIPSS
301: SFSVPKSVRS SDRRAPQNSG WYPYEDDDTS SFGSYRQKQN FSDNLSQSST GSYGSSTNKE RGPNKISQVK SVSVSKSRFA DSPKDILCQG DADSQVEASV
401: VRTISPQAPI LEDKLVDPFS SQQNDCSGGD QIKSKRYGLN SKGNFDVRGE RIDVKCEQKS NGSRKDGFSG ETAKKTYGQK YLKQLNASCP DGHIGNKNPR
501: KANSDDSRSS SLEDEATSKR YEGKSKQDDN NFGVQGVNKR YDNCSKEGYN NAFGFDSITK TCDEESIEDD CAKSLSSNGE NAKRVGKNES SVSERTNTSS
601: HVSSDAGLDE IQSSAGKSGD SSFFGGFLKK GFKDLSLFNQ SMDSVKVSIN GHPISERALR KAEKKAGPVS PGSYWYDQRA GFWGVMGHEC SGIIPPFIKE
701: FSYSMPKNCA GGTTGVLVNG RELHQKDFDL LVKRGLQRFS EKSYTVDISG TVTDATTGDK LRSLGKLAPT IEKMKRGFGM HVPEEIS
101: PPEYYRSSRH AGRYGQGGPL SSYDQRSVCD DRYARQPSGR FRQPRPEGQW EGYGYGGHHS SCQCAQCVHA QRAMPPQEES IPMARFFAGQ QRPPYQFDRS
201: ASSISSEYDR RSVASSLYSH LSMSKRRVEY FSKRADSFCR PTKGGAPFVV CSSCNQLLQL PPGKCTSPKQ NRVQCGSCSE VVTFDFKPKG VKVHPVIPSS
301: SFSVPKSVRS SDRRAPQNSG WYPYEDDDTS SFGSYRQKQN FSDNLSQSST GSYGSSTNKE RGPNKISQVK SVSVSKSRFA DSPKDILCQG DADSQVEASV
401: VRTISPQAPI LEDKLVDPFS SQQNDCSGGD QIKSKRYGLN SKGNFDVRGE RIDVKCEQKS NGSRKDGFSG ETAKKTYGQK YLKQLNASCP DGHIGNKNPR
501: KANSDDSRSS SLEDEATSKR YEGKSKQDDN NFGVQGVNKR YDNCSKEGYN NAFGFDSITK TCDEESIEDD CAKSLSSNGE NAKRVGKNES SVSERTNTSS
601: HVSSDAGLDE IQSSAGKSGD SSFFGGFLKK GFKDLSLFNQ SMDSVKVSIN GHPISERALR KAEKKAGPVS PGSYWYDQRA GFWGVMGHEC SGIIPPFIKE
701: FSYSMPKNCA GGTTGVLVNG RELHQKDFDL LVKRGLQRFS EKSYTVDISG TVTDATTGDK LRSLGKLAPT IEKMKRGFGM HVPEEIS
001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.