Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G343700.1 | Wheat | cytosol | 95.78 | 96.23 |
| TraesCS7B01G247600.1 | Wheat | cytosol | 94.72 | 96.08 |
| HORVU7Hr1G082720.10 | Barley | cytosol, nucleus | 87.34 | 87.24 |
| Os02t0258300-01 | Rice | nucleus | 69.4 | 70.31 |
| KXG29961 | Sorghum | nucleus | 66.47 | 65.62 |
| Zm00001d016081_P002 | Maize | nucleus | 64.6 | 64.67 |
| Zm00001d053382_P002 | Maize | nucleus | 62.25 | 64.36 |
| TraesCS7A01G351500.1 | Wheat | nucleus | 54.75 | 56.74 |
| Bra037384.1-P | Field mustard | nucleus | 11.37 | 42.36 |
| GSMUA_Achr7P14150_001 | Banana | nucleus | 36.69 | 41.29 |
| GSMUA_Achr10P... | Banana | nucleus | 37.51 | 40.82 |
| KRG99688 | Soybean | cytosol | 3.17 | 39.71 |
| GSMUA_Achr10P... | Banana | cytosol | 35.87 | 39.43 |
| GSMUA_Achr10P... | Banana | nucleus | 33.65 | 38.22 |
| CDX79176 | Canola | cytosol | 4.92 | 37.17 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 32.94 | 33.1 |
| CDY42041 | Canola | cytosol | 24.97 | 32.97 |
| CDX71720 | Canola | cytosol | 28.02 | 32.3 |
| Bra004541.1-P | Field mustard | nucleus | 25.21 | 32.04 |
| CDX80013 | Canola | nucleus | 24.74 | 31.73 |
| CDY11374 | Canola | cytosol | 27.43 | 31.58 |
| Bra007625.1-P | Field mustard | cytosol | 27.2 | 31.31 |
| CDY11373 | Canola | cytosol | 26.14 | 30.42 |
| AT3G61670.1 | Thale cress | nucleus | 28.02 | 30.25 |
| AT2G46380.1 | Thale cress | nucleus | 26.96 | 29.95 |
| Bra033264.1-P | Field mustard | nucleus | 19.46 | 28.57 |
| CDX90032 | Canola | nucleus | 18.64 | 28.39 |
| CDY15177 | Canola | nucleus | 18.52 | 28.37 |
| KRH68892 | Soybean | nucleus | 30.01 | 28.32 |
| KRG97141 | Soybean | nucleus | 30.13 | 28.21 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 25.44 | 27.78 |
| CDY48504 | Canola | nucleus | 18.29 | 27.71 |
| CDX91876 | Canola | nucleus | 18.76 | 27.4 |
| KRH06502 | Soybean | nucleus | 28.6 | 27.35 |
| CDY67475 | Canola | nucleus | 18.52 | 26.73 |
| KRH47938 | Soybean | nucleus | 28.02 | 26.73 |
| Bra000943.1-P | Field mustard | nucleus | 18.64 | 26.5 |
| PGSC0003DMT400032053 | Potato | nucleus | 29.07 | 26.22 |
| Solyc08g082040.2.1 | Tomato | nucleus | 28.96 | 26.14 |
| PGSC0003DMT400000290 | Potato | nucleus | 29.89 | 25.4 |
| Solyc01g095590.2.1 | Tomato | nucleus | 28.72 | 25.34 |
| CDY07174 | Canola | nucleus | 18.76 | 25.16 |
| AT1G01440.1 | Thale cress | nucleus | 18.87 | 24.25 |
| AT4G01090.1 | Thale cress | nucleus | 19.7 | 23.53 |
| TraesCS1A01G425200.2 | Wheat | nucleus | 21.69 | 23.51 |
| TraesCS3A01G224200.2 | Wheat | nucleus | 20.63 | 21.1 |
Protein Annotations
| EnsemblPlants:TraesCS7A01G336000.1 | EnsemblPlantsGene:TraesCS7A01G336000 | InterPro:Zinc_ribbon_12 | ncoils:Coil | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF7 |
| PFAM:PF11331 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7A:+:491571359..491576519
Molecular Weight (calculated)
94055.2 Da
IEP (calculated)
7.450
GRAVY (calculated)
-0.700
Length
853 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGEEGSGAS CSASAAAAAA AEQQVRVVRC PKCEKFLPEL PNYSVYVCGG CGTTLQAKKH SAPETTCLDK TDVVHVKYLE VLESSPEKKE PVSEANFETI
101: SEENSQRVQA TPEERLVTQR MMPEHRDSRC SSGDDQIPRE PSSLMFEATL RDDGTETEIR EAKYRRIRNE EKGEVKQPVR PSDRSRISVV DTIPPNAYLG
201: EHQMKSSFGD ANGSQRADGR NMDGPSSVSG LEKDRAELLR MLDELRDQVQ RSCEITEKPS VGASTSRVAD ASSSYSPHEL LSRLRHGSPQ LQRNGSQCSP
301: SLSGQNPGVP HTYASVPTHQ DLHGYREPAT HMGAPCYPVG QYPWRNCDSY FFGQHNHDPL VSYHHGGFYH QPACSCLHCH HREFLPVQGA PVGFNHHRVP
401: YPGAYPVNGS VMFGMQNNNS RGINASIHRG HMRGNLRKKP PQTCEPIACG APFTICYNCY EVLQLPKKCP LPGKDEYKLR CGSCSHVIVV KLDGSRLDVS
501: APSPISHMSA ASRNNSSDVQ GSNAYSATDE RLLPLYSFSA GSHCSRERDL QSNSSDTEKV QGISSSSSIF EDENNPARSN SQRGTPRSSD LPVEAQVVSR
601: VPSLPLHHHF AHSPSERVVN GSGKGSRSTR SEHEKTVLTE TCRHNTVKDV RVVSVMSLSD DEYEDPDCSQ DPGVGAQHVD RSIATKTGDS FFTNLMKKSF
701: KINNGMGNGR AKVFINGYPI SDRAVKKAEK IAGPIYPGEY WYDYRAGFWG VMGQSCLGMI PPYIPQLNYP MPKNCAGGNT GIFINGRELH QKDFDLLVGR
801: GLSESPDRSY KVEMSGKVYD EVSGEELYCL GKLAPTVEKM KRGFGMRPPR TIR
101: SEENSQRVQA TPEERLVTQR MMPEHRDSRC SSGDDQIPRE PSSLMFEATL RDDGTETEIR EAKYRRIRNE EKGEVKQPVR PSDRSRISVV DTIPPNAYLG
201: EHQMKSSFGD ANGSQRADGR NMDGPSSVSG LEKDRAELLR MLDELRDQVQ RSCEITEKPS VGASTSRVAD ASSSYSPHEL LSRLRHGSPQ LQRNGSQCSP
301: SLSGQNPGVP HTYASVPTHQ DLHGYREPAT HMGAPCYPVG QYPWRNCDSY FFGQHNHDPL VSYHHGGFYH QPACSCLHCH HREFLPVQGA PVGFNHHRVP
401: YPGAYPVNGS VMFGMQNNNS RGINASIHRG HMRGNLRKKP PQTCEPIACG APFTICYNCY EVLQLPKKCP LPGKDEYKLR CGSCSHVIVV KLDGSRLDVS
501: APSPISHMSA ASRNNSSDVQ GSNAYSATDE RLLPLYSFSA GSHCSRERDL QSNSSDTEKV QGISSSSSIF EDENNPARSN SQRGTPRSSD LPVEAQVVSR
601: VPSLPLHHHF AHSPSERVVN GSGKGSRSTR SEHEKTVLTE TCRHNTVKDV RVVSVMSLSD DEYEDPDCSQ DPGVGAQHVD RSIATKTGDS FFTNLMKKSF
701: KINNGMGNGR AKVFINGYPI SDRAVKKAEK IAGPIYPGEY WYDYRAGFWG VMGQSCLGMI PPYIPQLNYP MPKNCAGGNT GIFINGRELH QKDFDLLVGR
801: GLSESPDRSY KVEMSGKVYD EVSGEELYCL GKLAPTVEKM KRGFGMRPPR TIR
001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.