Factsheet for Bra004541.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX80013	Canola	nucleus	87.78	88.57
AT2G46380.1	Thale cress	nucleus	62.44	54.56
Bra037384.1-P	Field mustard	nucleus	16.84	49.34
KRG99688	Soybean	cytosol	4.77	47.06
Bra007625.1-P	Field mustard	cytosol	43.96	39.81
Bra000943.1-P	Field mustard	nucleus	26.83	30.0
Bra033264.1-P	Field mustard	nucleus	25.19	29.09
GSMUA_Achr10P...	Banana	nucleus	32.34	28.89
KRG97141	Soybean	nucleus	39.05	28.76
GSMUA_Achr7P14150_001	Banana	nucleus	32.19	28.5
KRH68892	Soybean	nucleus	38.3	28.43
GSMUA_Achr10P...	Banana	nucleus	32.79	28.06
VIT_15s0046g01270.t01	Wine grape	nucleus	31.74	27.27
GSMUA_Achr3P25070_001	Banana	vacuole	27.87	27.02
GSMUA_Achr10P...	Banana	cytosol	31.0	26.8
KRH06502	Soybean	nucleus	35.47	26.68
KRH47938	Soybean	nucleus	35.02	26.29
TraesCS7A01G336000.1	Wheat	nucleus	32.04	25.21
TraesCS7B01G247600.1	Wheat	cytosol	31.45	25.09
Zm00001d053382_P002	Maize	nucleus	30.55	24.85
Os02t0258300-01	Rice	nucleus	31.15	24.82
TraesCS7A01G351500.1	Wheat	nucleus	30.4	24.79
EER88427	Sorghum	nucleus	29.36	24.75
TraesCS7D01G343700.1	Wheat	cytosol	31.3	24.73
TraesCS7B01G276600.1	Wheat	nucleus	30.25	24.52
Zm00001d046072_P001	Maize	cytosol	29.36	24.41
TraesCS7D01G371500.1	Wheat	nucleus	29.66	24.06
Os06t0524300-01	Rice	nucleus	28.91	23.92
Zm00001d016081_P002	Maize	nucleus	30.25	23.83
HORVU0Hr1G021800.1	Barley	nucleus	28.91	23.8
KXG29961	Sorghum	nucleus	30.55	23.73
PGSC0003DMT400000290	Potato	nucleus	35.47	23.71
Solyc01g095590.2.1	Tomato	nucleus	33.68	23.37
HORVU7Hr1G082720.10	Barley	cytosol, nucleus	29.51	23.18
Os01t0621300-01	Rice	nucleus	25.78	21.44
EES03295	Sorghum	nucleus	25.48	21.43
Zm00001d044191_P004	Maize	nucleus	25.04	21.16
TraesCS3B01G253700.2	Wheat	nucleus	24.89	20.98
Zm00001d011373_P002	Maize	nucleus	25.34	20.96
Os05t0586400-01	Rice	nucleus	24.29	20.9
TraesCS1B01G459600.2	Wheat	plastid	24.44	20.87
KXG22639	Sorghum	nucleus	24.44	20.71
TraesCS3D01G229400.1	Wheat	nucleus	24.44	20.58
TraesCS1D01G434200.2	Wheat	nucleus	23.84	20.46
TraesCS1A01G425200.2	Wheat	nucleus	23.55	20.08
HORVU3Hr1G055550.3	Barley	nucleus	23.7	20.05
Zm00001d009716_P001	Maize	nucleus	22.35	19.63
HORVU1Hr1G092980.14	Barley	plastid	24.59	18.81
TraesCS3A01G224200.2	Wheat	nucleus	23.1	18.59

Protein Annotations

EnsemblPlants:Bra004541.1	EnsemblPlants:Bra004541.1-P	EnsemblPlantsGene:Bra004541	InterPro:Zinc_ribbon_12	ncoils:Coil	PANTHER:PTHR31105
PANTHER:PTHR31105:SF3	PFAM:PF11331	SEG:seg	UniParc:UPI00025474AB	UniProt:M4CK07	MapMan:35.2

Description

AT3G61670 (E=2e-129) | unknown protein

Coordinates

chrA05:-:717754..720067

Molecular Weight (calculated)

74916.7 Da

IEP (calculated)

8.073

GRAVY (calculated)

-0.817

Length

671 amino acids

Sequence
(BLAST)

001: MAESTIEVKL VRCPKCKNLL PEPKDCSFFQ CGGCGTVLCA KNKDHEADPG PDKSVKTRAK ETEVNSCSSE EEPDSDDDSS RHQQTGQTDV PCSKLNVVSG
101: SQPGLDRSFR FSAPNYFQDS VSSDEAIQQD RAELVKKLDK LKEHLHQPKE QQIPRSSKKP PLRFPSSGKH LAGPYYHQNP EPEPLRFHMH ERTQQQSHHH
201: YSRQYTSNNG HDLFNTHQRN GMLLHHSTCS CSHCYDPYHR ASGSVYPPSG LPDALHNIGF YPYERSAAFP SPLHSPRSFI PPHPPASQSR GHCIPSRAVS
301: SSGGPRLIHP VAGGAPFINC KKCSKILKLP DKTDTATRKP QRLRCGACSC LIDFSFADDK KLILSTDPAS ARGEEEETLS RLHWLTALDI SSDATDRGPD
401: YVSTGPASPS FSEYELSSDS QTGRKLIPDL PFYSSINARD RSGTRSQSSR SEQNRVTLSK TVKRQNSMKE ASVLIEMDVN DYSHNNGVSQ DSADDYREED
501: GRTRKGGFAS MVKSSFKDLK KSMQNEGESD VLVNEHLVAE RLVKMAEKQA GPIRPGNYWY DYRAGFWGVM GGQCLGILPP FIEELNYPMP ENCAGGNTRV
601: FVNGRELHEK DLRLLIARGL PRDRDRSYTV YITGRVIDED TGEELKSLGK LAPTVDKLKR GFGMRVPRRY A

Best Arabidopsis Sequence Match ( AT2G46380.1 )
(BLAST)

001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT

Arabidopsis Description

Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.