Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G371500.1 | Wheat | nucleus | 96.74 | 96.86 |
| HORVU0Hr1G021800.1 | Barley | nucleus | 88.53 | 89.94 |
| TraesCS7A01G351500.1 | Wheat | nucleus | 83.45 | 83.96 |
| Os06t0524300-01 | Rice | nucleus | 67.51 | 68.93 |
| EER88427 | Sorghum | nucleus | 59.3 | 61.68 |
| Zm00001d046072_P001 | Maize | cytosol | 56.76 | 58.24 |
| TraesCS7B01G247600.1 | Wheat | cytosol | 53.38 | 52.56 |
| Bra037384.1-P | Field mustard | nucleus | 12.8 | 46.29 |
| KRG99688 | Soybean | cytosol | 3.5 | 42.65 |
| GSMUA_Achr10P... | Banana | nucleus | 38.77 | 40.94 |
| GSMUA_Achr7P14150_001 | Banana | nucleus | 35.51 | 38.79 |
| GSMUA_Achr10P... | Banana | cytosol | 36.11 | 38.53 |
| GSMUA_Achr10P... | Banana | nucleus | 34.9 | 38.48 |
| CDX79176 | Canola | cytosol | 4.95 | 36.28 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 32.97 | 32.16 |
| CDY42041 | Canola | cytosol | 24.64 | 31.58 |
| CDX71720 | Canola | cytosol | 27.66 | 30.95 |
| CDY11374 | Canola | cytosol | 27.66 | 30.9 |
| Bra007625.1-P | Field mustard | cytosol | 27.29 | 30.5 |
| Bra004541.1-P | Field mustard | nucleus | 24.52 | 30.25 |
| CDX80013 | Canola | nucleus | 24.28 | 30.23 |
| AT3G61670.1 | Thale cress | nucleus | 28.02 | 29.37 |
| CDY48504 | Canola | nucleus | 19.93 | 29.31 |
| CDY11373 | Canola | cytosol | 25.85 | 29.2 |
| CDX90032 | Canola | nucleus | 19.44 | 28.75 |
| Bra033264.1-P | Field mustard | nucleus | 19.93 | 28.4 |
| CDY15177 | Canola | nucleus | 19.08 | 28.37 |
| AT2G46380.1 | Thale cress | nucleus | 26.21 | 28.26 |
| CDX91876 | Canola | nucleus | 19.57 | 27.74 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 26.09 | 27.66 |
| KRH06502 | Soybean | nucleus | 29.71 | 27.58 |
| KRH68892 | Soybean | nucleus | 30.07 | 27.54 |
| KRG97141 | Soybean | nucleus | 30.19 | 27.44 |
| Bra000943.1-P | Field mustard | nucleus | 19.44 | 26.83 |
| PGSC0003DMT400032053 | Potato | nucleus | 30.43 | 26.64 |
| Solyc08g082040.2.1 | Tomato | nucleus | 30.31 | 26.56 |
| KRH47938 | Soybean | nucleus | 28.5 | 26.4 |
| CDY67475 | Canola | nucleus | 18.84 | 26.4 |
| PGSC0003DMT400000290 | Potato | nucleus | 30.56 | 25.2 |
| CDY07174 | Canola | nucleus | 19.32 | 25.16 |
| AT1G01440.1 | Thale cress | nucleus | 20.17 | 25.15 |
| Solyc01g095590.2.1 | Tomato | nucleus | 28.86 | 24.72 |
| TraesCS1B01G459600.2 | Wheat | plastid | 22.1 | 23.28 |
| AT4G01090.1 | Thale cress | nucleus | 20.05 | 23.25 |
| TraesCS3B01G253700.2 | Wheat | nucleus | 20.89 | 21.73 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G276600.1 | EnsemblPlantsGene:TraesCS7B01G276600 | InterPro:Zinc_ribbon_12 | ncoils:Coil | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF7 |
| PFAM:PF11331 | SEG:seg | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr7B:+:506021470..506026442
Molecular Weight (calculated)
91325.5 Da
IEP (calculated)
7.467
GRAVY (calculated)
-0.739
Length
828 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGMEGDEAG AAAAAAARIR VVRCPKCDKF LPELPAYSVY VCGGCGATLQ AKRKNSAQAL DTSDNGNMKY LEVLETVPET SEATMAGASI EYKSVPNRMP
101: PLHSRSVYSR DNSRIARETS TSSVKANTRD DVREAKYMRF RNVENGETAH PVRARGVSDI RSRSPIDSVP PNACRGEGPA DHHLKSRNTY SNREHANDTD
201: LDGPSRVRDL EKDRAELLRM LDELRDQVQQ SCEVNGPDTS ATVNRAADAS SSYNNIHERS SQFRHDPSQL HRKGTHHSSS MNMRNPSVPH VYGPLPAQQN
301: LHGYVEPIPH ARTSSYPAGP YPWRNFDNYF FGQHDPDPLL SCHHEGFYHQ AACSCSHCYH REFLPVQGTP LGFSDQRAPY LVNSYGAYPV DGPLLGQQRY
401: NSRGANPSLQ QHNLRANVSK KPAQTCEPIA GGAPFTICYN CYEVLQLPNK RSLLGKEYKL RCGSCSHTIV IKLDGTRLDV SELAPNAHLS PAPQNGIGDN
501: MADNLRATAD DRLLPPYAFS VASQQSQEKD KHSNSSETDS KRTPLGTNSE DSPQSRDLPA EDNVISRTPS LPRRDNCGFS PSEGSGIGSR STRSEHEKVV
601: LLTETCKQNS IKDVCVADET HSTDNEFDDP DYTQDILNVP QDPGHTRATK VGDSFFTNLI KKSFKMNNGT RNGRARVFVN GFPIPDRAVR KAEKLAGPIY
701: PGDYWYDYRA GFWGVVGQPC LGMIPPYIPE FNYPMPKNCG GGNTGIYING RELHQKDLDL LVSRGLSDSP ERSYIVENSG KVTDEASGEE LYGLGKLAPT
801: VEKLRRGFGM RVPKVIVTGQ HGTIITHG
101: PLHSRSVYSR DNSRIARETS TSSVKANTRD DVREAKYMRF RNVENGETAH PVRARGVSDI RSRSPIDSVP PNACRGEGPA DHHLKSRNTY SNREHANDTD
201: LDGPSRVRDL EKDRAELLRM LDELRDQVQQ SCEVNGPDTS ATVNRAADAS SSYNNIHERS SQFRHDPSQL HRKGTHHSSS MNMRNPSVPH VYGPLPAQQN
301: LHGYVEPIPH ARTSSYPAGP YPWRNFDNYF FGQHDPDPLL SCHHEGFYHQ AACSCSHCYH REFLPVQGTP LGFSDQRAPY LVNSYGAYPV DGPLLGQQRY
401: NSRGANPSLQ QHNLRANVSK KPAQTCEPIA GGAPFTICYN CYEVLQLPNK RSLLGKEYKL RCGSCSHTIV IKLDGTRLDV SELAPNAHLS PAPQNGIGDN
501: MADNLRATAD DRLLPPYAFS VASQQSQEKD KHSNSSETDS KRTPLGTNSE DSPQSRDLPA EDNVISRTPS LPRRDNCGFS PSEGSGIGSR STRSEHEKVV
601: LLTETCKQNS IKDVCVADET HSTDNEFDDP DYTQDILNVP QDPGHTRATK VGDSFFTNLI KKSFKMNNGT RNGRARVFVN GFPIPDRAVR KAEKLAGPIY
701: PGDYWYDYRA GFWGVVGQPC LGMIPPYIPE FNYPMPKNCG GGNTGIYING RELHQKDLDL LVSRGLSDSP ERSYIVENSG KVTDEASGEE LYGLGKLAPT
801: VEKLRRGFGM RVPKVIVTGQ HGTIITHG
001: MADSTKVRLV RCPKCENLLS EPEDSPFFQC GGCFTVLRAK TKEREADSVS VKSVEDTAKP VSASSPEKAI LDSSETSSDS DVPSLRHHHN VVPVDVESDP
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q9M371]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.