Factsheet for Bra000943.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra000267.1-P
Bra001393.1-P
Bra002606.1-P
Bra004709.1-P
Bra005847.1-P
Bra006738.1-P
Bra006774.1-P
Bra007528.1-P
Bra008613.1-P
Bra009045.1-P
Bra009093.1-P
Bra012095.1-P
Bra014494.1-P
Bra017091.1-P
Bra017406.1-P
Bra020343.1-P
Bra023570.1-P
Bra023895.1-P
Bra024800.1-P
Bra026274.1-P
Bra026572.1-P
Bra028196.1-P
Bra033264.1-P
Bra034169.1-P
Bra034860.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G01090.1	Bra033264.1-P	AT1G01440.1	21798944
AT4G01090.1	Bra017406.1-P	AT2G02950.1	21798944
AT4G01090.1	Bra024800.1-P	AT2G02950.1	21798944
AT4G01090.1	Bra026572.1-P	AT2G02950.1	21798944
AT4G01090.1	Bra017091.1-P	AT2G39100.1	21798944
AT4G01090.1	Bra000267.1-P	AT2G42580.1	21798944
AT4G01090.1	Bra004709.1-P	AT2G42580.1	21798944
AT4G01090.1	Bra001393.1-P	AT3G11200.1	21798944
AT4G01090.1	Bra034169.1-P	AT3G11200.1	21798944
AT4G01090.1	Bra034860.1-P	AT3G11200.1	21798944
AT4G01090.1	Bra023895.1-P	AT3G21215.1	21798944
AT4G01090.1	Bra007528.1-P	AT3G60360.1	21798944
AT4G01090.1	Bra014494.1-P	AT3G60360.1	21798944
AT4G01090.1	Bra026274.1-P	AT4G28230.1	21798944
AT4G01090.1	Bra005847.1-P	AT5G05190.1	21798944
AT4G01090.1	Bra009093.1-P	AT5G05190.1	21798944
AT4G01090.1	Bra009045.1-P	AT5G10270.1	21798944
AT4G01090.1	Bra008613.1-P	AT5G16560.1	21798944
AT4G01090.1	Bra023570.1-P	AT5G16560.1	21798944
AT4G01090.1	Bra028196.1-P	AT5G38640.1	21798944
AT4G01090.1	Bra006774.1-P	AT5G58300.1	21798944
AT4G01090.1	Bra002606.1-P	AT5G58950.1	21798944
AT4G01090.1	Bra006738.1-P	AT5G58950.1	21798944
AT4G01090.1	Bra020343.1-P	AT5G58950.1	21798944
AT4G01090.1	Bra012095.1-P	AT5G66720.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY67475	Canola	nucleus	88.0	89.34
CDX91876	Canola	nucleus	76.33	78.42
Bra037384.1-P	Field mustard	nucleus	26.83	70.31
AT4G01090.1	Thale cress	nucleus	58.5	49.16
Bra033264.1-P	Field mustard	nucleus	43.33	44.75
Bra004541.1-P	Field mustard	nucleus	30.0	26.83
Bra007625.1-P	Field mustard	cytosol	31.5	25.51
GSMUA_Achr3P25070_001	Banana	vacuole	26.83	23.27
GSMUA_Achr7P14150_001	Banana	nucleus	28.0	22.16
GSMUA_Achr10P...	Banana	nucleus	28.67	21.94
GSMUA_Achr10P...	Banana	nucleus	27.0	21.57
GSMUA_Achr10P...	Banana	cytosol	27.33	21.13
Os01t0621300-01	Rice	nucleus	27.67	20.57
TraesCS3D01G229400.1	Wheat	nucleus	27.0	20.33
TraesCS3B01G253700.2	Wheat	nucleus	26.67	20.1
TraesCS1B01G459600.2	Wheat	plastid	26.17	19.97
Os05t0586400-01	Rice	nucleus	25.83	19.87
TraesCS1D01G434200.2	Wheat	nucleus	25.83	19.82
TraesCS7D01G371500.1	Wheat	nucleus	27.0	19.59
TraesCS7B01G276600.1	Wheat	nucleus	26.83	19.44
TraesCS1A01G425200.2	Wheat	nucleus	25.5	19.44
HORVU3Hr1G055550.3	Barley	nucleus	25.5	19.29
Zm00001d053382_P002	Maize	nucleus	26.33	19.15
HORVU0Hr1G021800.1	Barley	nucleus	25.83	19.02
TraesCS7A01G351500.1	Wheat	nucleus	25.83	18.83
Os02t0258300-01	Rice	nucleus	26.33	18.76
TraesCS3A01G224200.2	Wheat	nucleus	26.0	18.7
EES03295	Sorghum	nucleus	24.83	18.67
TraesCS7B01G247600.1	Wheat	cytosol	26.17	18.67
Zm00001d016081_P002	Maize	nucleus	26.5	18.66
TraesCS7A01G336000.1	Wheat	nucleus	26.5	18.64
KXG29961	Sorghum	nucleus	26.83	18.63
Zm00001d011373_P002	Maize	nucleus	25.17	18.62
KXG22639	Sorghum	nucleus	24.5	18.56
Zm00001d044191_P004	Maize	nucleus	24.33	18.39
TraesCS7D01G343700.1	Wheat	cytosol	26.0	18.37
Os06t0524300-01	Rice	nucleus	24.83	18.37
EER88427	Sorghum	nucleus	24.33	18.34
Zm00001d046072_P001	Maize	cytosol	24.33	18.09
Zm00001d009716_P001	Maize	nucleus	22.83	17.93
HORVU1Hr1G092980.14	Barley	plastid	25.5	17.45
HORVU7Hr1G082720.10	Barley	cytosol, nucleus	24.17	16.98

Protein Annotations

EnsemblPlants:Bra000943.1	EnsemblPlants:Bra000943.1-P	EnsemblPlantsGene:Bra000943	InterPro:Zinc_ribbon_12	ncoils:Coil	PANTHER:PTHR31105
PANTHER:PTHR31105:SF3	PFAM:PF11331	SEG:seg	UniParc:UPI00025406F8	UniProt:M4C9R4	MapMan:35.2

Description

AT4G01090 (E=2e-079) | extra-large G-protein-related

Coordinates

chrA03:-:14060892..14063452

Molecular Weight (calculated)

66375.3 Da

IEP (calculated)

7.090

GRAVY (calculated)

-0.795

Length

600 amino acids

Sequence
(BLAST)

001: MRSRGDQVDV RSDAGSSKET TNSRHGSQRS GKSQDLVEPN SNPIEYTERE RAELLRRLDS IKDHLLRGGV GGALNENQQL LRPVHVRAPS HSPAPSYYHH
101: HQRPYPYPPQ PQGYHHHQDP FRRPPSFQGY PGGQYADVVD PHSYFPATPS RYGDMMPPYS PVSSHQRLYT TPVHTYNNSL SFPSSMSSPG PRGGGYARCP
201: SDLDSETGGG GAFPRGYVKK AVSESDDARR CHPLAGGAPF IACRSCFELL YLPKKKLLAQ ERLHKLQCGA CSEVTSFSIV DKKLVFTTTE PVSVEDRSTT
301: NTVVVEEPVQ ELKNQGDTTR STRSESQHSD DEESSSVSSE QQQKEVKSVR RRAKDSKASE PAAAAAPESA SLLELFEHSN VNRAALAYGM AELGYIKPDK
401: QEVFMKQDSV KPESIVATET EVSYNGYTNT TEISEDSNGR EDKNRTRNPN EDGGKSIEVW VNGHLIPEDL VSSAEKLAGP IQAGKYWYDY RAGFWGVMGK
501: PCLGIIPPFI EEFSHPMPDS CAAGNTEVYV NGRELHKRDL ELLVGRGLPR DKNRSYILDI TGRILDGDSG EELKSLGRLA PTIQKTKHGF GMRVPRSLAS

Best Arabidopsis Sequence Match ( AT4G01090.1 )
(BLAST)

001: MRSRGDVSEA EGTRSDAGSS RSEEETSLKE KHSNSRAGSQ RSGKSLRNDE PNYGSDSSSK NTSSSNNPIE YTEHERAELL RRLDSIKDHL LRGGGGGNNV
101: VDKPKEPDQN QPFLRPVHLH GHANHNPGPS YYHQYPEPIQ YPGPVHGMYP QAYQDPYGYQ RRPPPVPNPN WYPPGHYPNQ MARQYPGGQY VELGPDIVEP
201: HSYYPATPGR YGDLPPYSPV SSHHREEKLA TQYSDMPPYS PVSSHHRGEK LTTPYSPRVN NGSSFPSSMG TPGPRGGYAR WPSEHDSEMG GAFARGYVKK
301: AVSDTGVRRC HPLAGGAPFI ACHSCFELLY LPKKKLLSQE RLHKLQCGAC SEVISFTIVD RKLVFSSGNE ETKPVSLEVE DRNTTNTVVI EEEVSSVDFN
401: SSGRDIPRKD EEEPVQELRN HQDTITTQSV RSESQHSDDE ERSSNSSEQQ QKEVKSVRRR GKGSKAPEPA APDNASLLEL FEYSNVNRAA LAYGMAQLGY
501: EKPDKQKSFM TQDSLKPESV ATETEVSYNG YSNTEISEDS RYSNRKGSEY GSTEITTRSS TDQNEDQMKS LEVWVNGHLI PEDLVSSAEK LAGPIQAGKY
601: WYDYRAGFWG VMGKPCLGII PPFIEEFSHP MLDNCAAGNT DVFVNGRELH KRDFELLVGR GLPRDKNRSY IVDISGRILD QDSGEELHSL GKLAPTIEKV
701: KHGFGMRVPR SLAS

Arabidopsis Description

AT4G01090 protein [Source:UniProtKB/TrEMBL;Acc:Q9M155]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.