Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G229400.1 | Wheat | nucleus | 91.46 | 91.34 |
| HORVU3Hr1G055550.3 | Barley | nucleus | 87.44 | 87.77 |
| TraesCS3A01G224200.2 | Wheat | nucleus | 88.94 | 84.89 |
| Os01t0621300-01 | Rice | nucleus | 72.24 | 71.25 |
| EES03295 | Sorghum | nucleus | 64.57 | 64.41 |
| Zm00001d011373_P002 | Maize | nucleus | 64.32 | 63.13 |
| Zm00001d044191_P004 | Maize | nucleus | 62.94 | 63.1 |
| TraesCS1B01G459600.2 | Wheat | plastid | 45.35 | 45.93 |
| Bra037384.1-P | Field mustard | nucleus | 12.69 | 44.1 |
| CDX79176 | Canola | cytosol | 5.4 | 38.05 |
| CDY48504 | Canola | nucleus | 19.85 | 28.06 |
| CDY15177 | Canola | nucleus | 19.47 | 27.83 |
| CDX91876 | Canola | nucleus | 19.97 | 27.23 |
| CDY67475 | Canola | nucleus | 19.97 | 26.9 |
| CDX90032 | Canola | nucleus | 18.84 | 26.79 |
| Bra000943.1-P | Field mustard | nucleus | 20.1 | 26.67 |
| Bra033264.1-P | Field mustard | nucleus | 19.22 | 26.33 |
| CDY07174 | Canola | nucleus | 20.73 | 25.94 |
| CDX80013 | Canola | nucleus | 21.23 | 25.41 |
| CDY42041 | Canola | cytosol | 20.6 | 25.39 |
| Bra004541.1-P | Field mustard | nucleus | 20.98 | 24.89 |
| GSMUA_Achr3P25070_001 | Banana | vacuole | 21.11 | 24.28 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 25.13 | 23.56 |
| CDX71720 | Canola | cytosol | 21.86 | 23.51 |
| CDY11374 | Canola | cytosol | 21.73 | 23.35 |
| Bra007625.1-P | Field mustard | cytosol | 21.73 | 23.35 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 22.86 | 23.3 |
| AT1G01440.1 | Thale cress | nucleus | 19.35 | 23.19 |
| AT2G46380.1 | Thale cress | nucleus | 22.11 | 22.92 |
| AT3G61670.1 | Thale cress | nucleus | 22.61 | 22.78 |
| AT4G01090.1 | Thale cress | nucleus | 20.23 | 22.55 |
| CDY11373 | Canola | cytosol | 20.35 | 22.1 |
| TraesCS7B01G247600.1 | Wheat | cytosol | 22.49 | 21.28 |
| TraesCS7B01G276600.1 | Wheat | nucleus | 21.73 | 20.89 |
| KRH68892 | Soybean | nucleus | 23.37 | 20.58 |
| KRG97141 | Soybean | nucleus | 23.37 | 20.42 |
| KRH06502 | Soybean | nucleus | 21.98 | 19.62 |
| KRH47938 | Soybean | nucleus | 21.98 | 19.57 |
| Solyc01g095590.2.1 | Tomato | nucleus | 22.11 | 18.2 |
| PGSC0003DMT400032053 | Potato | nucleus | 21.61 | 18.18 |
| Solyc08g082040.2.1 | Tomato | nucleus | 21.36 | 17.99 |
| PGSC0003DMT400000290 | Potato | nucleus | 21.86 | 17.33 |
| KRG99688 | Soybean | cytosol | 1.01 | 11.76 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G253700.2 | EnsemblPlantsGene:TraesCS3B01G253700 | InterPro:Zinc_ribbon_12 | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF6 | PFAM:PF11331 |
| SEG:seg | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr3B:-:407182539..407189438
Molecular Weight (calculated)
89018.0 Da
IEP (calculated)
6.273
GRAVY (calculated)
-0.949
Length
796 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDLKEMKYR RRIGLQERAQ CSDQRAVDWG VLKQDPVELL RKLDELRDQI TRSCQVAEQP REHRRAGRRP PLLPDLPEPV PLPGYHRPRY GARYGPGLPL
101: SPCEPQHSDH GERYARQSSG RYRQYPGRQW DNGGIGHGNY HQYACASPHY LHGQRAAPQE EHIPMARYFA GQHECYRFER SPSISSDYDQ RSVASSLYSH
201: RSVSKKRAEY FRKKAEHLCR PMHGAAPFVV CSSCYNLLQL PMEKCMGWKQ NRLQCGSCSE IISVKRMKGK AIPYTSSPSF SLSKTEQSSH DRMRRDFEHQ
301: HHDDVTSAFY NLNEHSSMQI NIDFGDDNSV SSTISHERTD KECGSNRSIQ SKADGISLSP GRSGDIESPK DILCERDADC QDEHSVDGPV SPCSPILEDK
401: LVDPLCSQEK HNSSEDLGMD NGSDLNCKGE YNVNDDESVS MGSEQKVNEA ELVEESMCRK HDQKNKEDHC SSLEDVSKLH GQNSAKVDPD SLENGNEKHE
501: WTSKTDVTSS PESEGTCKKY DHNSKEDETS GLKVENTSNE FDKKNTADSN SALEHANTAI EFEGTSTSER YEENLMEQDN GKLHEPCAED ANALTESGSS
601: VNGRTNSGFS RGSSEAGLDE DQSSTGKSGD SSFFAGFLKK GFKDLSLFNQ SMDSVKVSIN GHPISERALK KAEKKAGPVE PGSYWYDCRA GFWGIMGREC
701: IGIIPPYIRE FNYPMPRNCA GGDTDVIVNG RELHQRDLDL LVGRGLPRIS GKSYSIEISG NITDDAGNKL RSLGKLAPTI EKLKRGFGMH VPEGFR
101: SPCEPQHSDH GERYARQSSG RYRQYPGRQW DNGGIGHGNY HQYACASPHY LHGQRAAPQE EHIPMARYFA GQHECYRFER SPSISSDYDQ RSVASSLYSH
201: RSVSKKRAEY FRKKAEHLCR PMHGAAPFVV CSSCYNLLQL PMEKCMGWKQ NRLQCGSCSE IISVKRMKGK AIPYTSSPSF SLSKTEQSSH DRMRRDFEHQ
301: HHDDVTSAFY NLNEHSSMQI NIDFGDDNSV SSTISHERTD KECGSNRSIQ SKADGISLSP GRSGDIESPK DILCERDADC QDEHSVDGPV SPCSPILEDK
401: LVDPLCSQEK HNSSEDLGMD NGSDLNCKGE YNVNDDESVS MGSEQKVNEA ELVEESMCRK HDQKNKEDHC SSLEDVSKLH GQNSAKVDPD SLENGNEKHE
501: WTSKTDVTSS PESEGTCKKY DHNSKEDETS GLKVENTSNE FDKKNTADSN SALEHANTAI EFEGTSTSER YEENLMEQDN GKLHEPCAED ANALTESGSS
601: VNGRTNSGFS RGSSEAGLDE DQSSTGKSGD SSFFAGFLKK GFKDLSLFNQ SMDSVKVSIN GHPISERALK KAEKKAGPVE PGSYWYDCRA GFWGIMGREC
701: IGIIPPYIRE FNYPMPRNCA GGDTDVIVNG RELHQRDLDL LVGRGLPRIS GKSYSIEISG NITDDAGNKL RSLGKLAPTI EKLKRGFGMH VPEGFR
001: MAESSTIEAR LVRCPKCKNL LQEPKDCPFF QCGGCGTVLC AKNKDREADL LSVKSVENRS KEIEVTSGSS EEESDSNASL RHQQDGQTET WDVHNDPSSK
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
101: MNVVDSGNND SQPGLDQIRK RTTKRCDLEG FRFSTSNYFT DSLSTDEAIE QDRAGLVRKL DKLKEQLVQP KEQQIPSSSS GFQKAPLRVF SSGRRIAGPS
201: YYQYYSEPEP PCLYNNNSDV SLHGPMHNPA NVPAYGDPHG FPMHERTLQP SHLHNSRQYI GNNGHDVFDT HPHNGMFHQS TCSCTHCYDP YHRASGSVFP
301: PSGLPDALRN PGFYPHERSF GFGTSLHSPR TFIPPGSQSP GPQLRGRCTS GFKDMRMNAV SRVHPSKPVS SSGGSRLIQP VAGGAPFINC INCFKLLKLP
401: EKIDSATRKK QRMRCGACSC VIDYSFVDKK LILSTDPASA RKPETHSRLR WETTANFSSD DYDNAAYEFH AMDRGSADVS TALVLISNTA QEMQITDATS
501: PSVSEDELSS DSSTVRKVNL ASPLHKQFEY SSINVRDRSG PRSQSSRSEQ DRVTLSKTAM RQNSMKEASV AIEMDVNDYS HNNEVSQDSA NDCTDDQGRT
601: KKGGFASIMK NSFKDLKKSI QNEGRSDVSI NGHPVAERLV KMAEKQAGPI RPGNYWYDYR AGFWGVLGSH CLGILPPFIE ELNYPMPENC AGGTTRVFVN
701: GRELHQKDLR LLTARGLPRD RDRSYTVYIS GRVIDEDTGE ELDSLGKLAP TVDKLKRGFG MRVPRRAT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q0WVG1]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.