CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG97141	Soybean	nucleus	92.26	91.55
KRG99688	Soybean	cytosol	5.09	67.65
KRH06502	Soybean	nucleus	63.5	64.35
KRH47938	Soybean	nucleus	61.84	62.53
VIT_15s0046g01270.t01	Wine grape	nucleus	42.37	49.04
CDX71720	Canola	cytosol	33.41	40.81
CDY11373	Canola	cytosol	32.85	40.52
AT3G61670.1	Thale cress	nucleus	35.4	40.51
AT2G46380.1	Thale cress	nucleus	34.4	40.49
CDY11374	Canola	cytosol	32.96	40.22
Bra007625.1-P	Field mustard	cytosol	32.85	40.08
CDY42041	Canola	cytosol	28.21	39.47
Bra004541.1-P	Field mustard	nucleus	28.43	38.3
CDX80013	Canola	nucleus	27.99	38.05
PGSC0003DMT400000290	Potato	nucleus	40.82	36.75
Solyc01g095590.2.1	Tomato	nucleus	39.16	36.61
GSMUA_Achr10P...	Banana	cytosol	29.87	34.79
GSMUA_Achr10P...	Banana	nucleus	29.76	34.31
GSMUA_Achr10P...	Banana	nucleus	28.43	34.22
GSMUA_Achr7P14150_001	Banana	nucleus	28.43	33.91
Zm00001d053382_P002	Maize	nucleus	30.2	33.09
Os02t0258300-01	Rice	nucleus	30.09	32.3
Zm00001d016081_P002	Maize	nucleus	29.87	31.69
KXG29961	Sorghum	nucleus	30.2	31.6
EER88427	Sorghum	nucleus	27.1	30.78
Os06t0524300-01	Rice	nucleus	27.43	30.58
HORVU0Hr1G021800.1	Barley	nucleus	27.21	30.18
TraesCS7B01G276600.1	Wheat	nucleus	27.54	30.07
TraesCS7D01G343700.1	Wheat	cytosol	28.21	30.04
TraesCS7A01G336000.1	Wheat	nucleus	28.32	30.01
TraesCS7D01G371500.1	Wheat	nucleus	27.32	29.87
TraesCS7B01G247600.1	Wheat	cytosol	27.77	29.85
Zm00001d046072_P001	Maize	cytosol	26.55	29.74
TraesCS7A01G351500.1	Wheat	nucleus	26.88	29.53
HORVU7Hr1G082720.10	Barley	cytosol, nucleus	27.32	28.92
GSMUA_Achr3P25070_001	Banana	vacuole	22.01	28.76
TraesCS1B01G459600.2	Wheat	plastid	20.91	24.05
Os01t0621300-01	Rice	nucleus	21.35	23.92
TraesCS3D01G229400.1	Wheat	nucleus	20.8	23.59
HORVU3Hr1G055550.3	Barley	nucleus	20.58	23.46
TraesCS1A01G425200.2	Wheat	nucleus	20.35	23.38
TraesCS3B01G253700.2	Wheat	nucleus	20.58	23.37
KXG22639	Sorghum	nucleus	20.46	23.36
EES03295	Sorghum	nucleus	20.58	23.31
TraesCS1D01G434200.2	Wheat	nucleus	20.02	23.15
Zm00001d044191_P004	Maize	nucleus	20.13	22.92
Os05t0586400-01	Rice	nucleus	19.58	22.69
Zm00001d011373_P002	Maize	nucleus	20.02	22.32
Zm00001d009716_P001	Maize	nucleus	18.81	22.25
HORVU1Hr1G092980.14	Barley	plastid	21.13	21.78
TraesCS3A01G224200.2	Wheat	nucleus	19.8	21.46

Protein Annotations

EMBL:ACUP02002127	EnsemblPlants:KRH68892	EnsemblPlantsGene:GLYMA_03G256300	EntrezGene:100814647	InterPro:Zinc_ribbon_12	ncoils:Coil
PANTHER:PTHR31105	PANTHER:PTHR31105:SF3	PFAM:PF11331	ProteinID:KRH68892	ProteinID:KRH68892.1	ProteinID:KRH68893.1
SEG:seg	UniParc:UPI00023379B5	UniProt:K7KH30	MapMan:35.2	:	:

Description

hypothetical protein

Coordinates

chr3:+:45115913..45121085

Molecular Weight (calculated)

100112.0 Da

IEP (calculated)

6.942

GRAVY (calculated)

-0.832

Length

904 amino acids

Sequence
(BLAST)

001: MSDSANKLRL VRCPKCQNLL PELADYSVYQ CGGCGAVLRA KHKGYVSGSL SDEGKVGLGG DSGKSESSLE KGLVDRSDAS DVDAKSSSVP SRDDNQRAVD
101: KVDNIDEGFQ NQPEDAGEKG VIDDDVDVGR NKDELGKTIG REQEEPPKSQ IGRENGSKFS NWPNGERNEM EGFWRKPRAD MENVRFSTSK YPDEGPSNGF
201: SSNYMESWRS RKESDGPNMV QHLEQDRAEL LRKLDELKVH ISKSSEMVHN PKGKILPEER MIPPDPHPYG GGSDPWFSDG SSGLNRTSRQ FFGTDKHVAG
301: SNHFNYHHDP YSYASGHDMA MPNFPLSMHN PNRYGDPLAS QMPRRGPHQF PQQPLHPYYP GRYVDTNPDS YELYSHNAML HPPTCSCFHC YDSKQRGSVP
401: ALPASFINSR FPDTPNDPML YHHEIPGAFG PHVHNSRTTI PPVTYRQKQL HARWASDFNS EMSGFVRSRP RKVMLASSSQ RCYPAAGGSP FISCHNCFEL
501: LLLPKKALVL VKNHQQKVQC GACSSEISFA VINKKLVISP NLETKGVPSR GDNSSNEVVS SRMSHSRGHV SRTGANFSSD DYSGYDFHSV DREPISLVAL
601: NSNKSREMPS FHSSSLSTSE DENSPEAMIA PREATKSIQR PTTDSLSPPA GSPLQEYFDY SSNNHAVNRF GKGNQSSRSE QEKTKVDKMS ARQNSLKETA
701: LATEMDVHDY SNTGVSQDSG DASREHDHPR SNRGGESFFA NIIKKSFRDF SRSNHTDERS KISVTVNGQP LSDRVVKKAE KLAGTIQPGN YWYDFRAGFW
801: GVMGGPCLGI IPPFIEEFNH PLPDKCSGGS TGVLVNGREL HQKDLDLLSG RGLPTDIDRS YIIEISGRVL DEDTGEELDS LGKLAPTVEK VKHGFGMKAP
901: RAAT

Best Arabidopsis Sequence Match ( AT3G61670.1 )
(BLAST)

001: MADSTKVRLV RCPKCENLLS EPEDSPFFQC GGCFTVLRAK TKEREADSVS VKSVEDTAKP VSASSPEKAI LDSSETSSDS DVPSLRHHHN VVPVDVESDP
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT

Arabidopsis Description

Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q9M371]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.