CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11374	Canola	cytosol	94.05	93.93
CDY11373	Canola	cytosol	85.95	86.77
AT3G61670.1	Thale cress	nucleus	64.86	60.76
KRG99688	Soybean	cytosol	4.32	47.06
CDY42041	Canola	cytosol	40.41	46.28
CDX80013	Canola	nucleus	41.08	45.71
CDX79176	Canola	cytosol	6.89	45.13
KRG97141	Soybean	nucleus	41.35	33.59
KRH68892	Soybean	nucleus	40.81	33.41
CDY67475	Canola	nucleus	26.62	33.33
CDY15177	Canola	nucleus	24.46	32.5
VIT_15s0046g01270.t01	Wine grape	nucleus	34.05	32.27
CDX91876	Canola	nucleus	25.27	32.02
CDY48504	Canola	nucleus	24.32	31.97
CDX90032	Canola	nucleus	23.92	31.61
KRH06502	Soybean	nucleus	37.97	31.5
KRH47938	Soybean	nucleus	37.7	31.21
GSMUA_Achr10P...	Banana	nucleus	32.03	30.23
GSMUA_Achr10P...	Banana	nucleus	30.27	29.83
GSMUA_Achr10P...	Banana	cytosol	30.54	29.12
GSMUA_Achr7P14150_001	Banana	nucleus	29.59	28.89
CDY07174	Canola	nucleus	24.73	28.77
Os02t0258300-01	Rice	nucleus	32.16	28.27
TraesCS7B01G247600.1	Wheat	cytosol	31.89	28.06
TraesCS7A01G336000.1	Wheat	nucleus	32.3	28.02
Zm00001d053382_P002	Maize	nucleus	31.22	28.0
EER88427	Sorghum	nucleus	30.0	27.89
GSMUA_Achr3P25070_001	Banana	vacuole	25.95	27.75
TraesCS7B01G276600.1	Wheat	nucleus	30.95	27.66
TraesCS7D01G343700.1	Wheat	cytosol	31.62	27.56
Zm00001d016081_P002	Maize	nucleus	31.62	27.46
TraesCS7D01G371500.1	Wheat	nucleus	30.68	27.45
TraesCS7A01G351500.1	Wheat	nucleus	30.41	27.34
KXG29961	Sorghum	nucleus	31.49	26.97
HORVU0Hr1G021800.1	Barley	nucleus	29.59	26.87
Zm00001d046072_P001	Maize	cytosol	29.05	26.64
Solyc01g095590.2.1	Tomato	nucleus	34.73	26.58
PGSC0003DMT400000290	Potato	nucleus	35.95	26.49
Os06t0524300-01	Rice	nucleus	28.65	26.14
HORVU7Hr1G082720.10	Barley	cytosol, nucleus	30.14	26.11
EES03295	Sorghum	nucleus	25.14	23.31
Os05t0586400-01	Rice	nucleus	24.32	23.08
Zm00001d044191_P004	Maize	nucleus	23.92	22.29
TraesCS1B01G459600.2	Wheat	plastid	23.65	22.26
KXG22639	Sorghum	nucleus	23.78	22.22
HORVU3Hr1G055550.3	Barley	nucleus	23.78	22.19
TraesCS1D01G434200.2	Wheat	nucleus	23.38	22.12
Os01t0621300-01	Rice	nucleus	24.05	22.06
TraesCS1A01G425200.2	Wheat	nucleus	23.38	21.98
Zm00001d011373_P002	Maize	nucleus	24.05	21.95
TraesCS3B01G253700.2	Wheat	nucleus	23.51	21.86
TraesCS3D01G229400.1	Wheat	nucleus	23.51	21.83
Zm00001d009716_P001	Maize	nucleus	21.89	21.2
HORVU1Hr1G092980.14	Barley	plastid	24.86	20.98
TraesCS3A01G224200.2	Wheat	nucleus	22.57	20.02

Protein Annotations

EnsemblPlants:CDX71720	EnsemblPlantsGene:GSBRNA2T00155411001	InterPro:Zinc_ribbon_12	ncoils:Coil	PANTHER:PTHR31105	PANTHER:PTHR31105:SF3
PFAM:PF11331	ProteinID:CDX71720	ProteinID:CDX71720.1	SEG:seg	UniParc:UPI0004EAE5D9	MapMan:35.2

Description

BnaC08g31540D

Coordinates

chrLK031795:-:126818..130128

Molecular Weight (calculated)

81090.7 Da

IEP (calculated)

7.432

GRAVY (calculated)

-0.705

Length

740 amino acids

Sequence
(BLAST)

001: MAESTKLRLV RCPKCENLLS EPEDSPFFQC GGCFTVLRAK IKEREVDSVS DKSVEDRAKP VSVNSTSSPE KASQTSLSDS DVTTPTSPSQ LNVPLAVESD
101: PCSKTKALDV GGNSSTLADK DDPKSQSGRQ EPGLDRFRKR TTKRCDSDSV INTNNRLSTS MYPPLSDEGT SSAPNYLPHS QSREAIEQDR AGLLRQLDKL
201: KEQLVQSCNV AGDSKPKEQA PNKAPPVRFY SSGTGPSYYH PEPQFPYNNN DHHGLMHPSY GRGPYFSGGG QFLGNNNDLF QQNGPFHHSS CTCYHCWRGS
301: VIPHDAPYNA GFYPPESVMG FAPPPHNHRA YPSSRAPPLH QPHGRWPVDS LPRVRPPPKV VLSGGSRHIR PLAGGAPFIT CQNCFELLQL PKKPEAGGGG
401: GKKEVKMRCG ACSCLIDLSV VNNKFVLSAA NNTGEAQARV AAAAADYTSD DYDLLGYVFH SLDDEQDKSQ DVQIVRSHSA SLSEDELSSD SLTAKPLDSP
501: LHENFVNYSS INHERAGAGS RSFSSEQERV TLSKTMRQNS MKEVSLASEM EVSFNDYSGV SKDHHHQQRS KKNGFASIVK KSFKDLTKSI HNDEGNRSSV
601: SINGHSLTER MLRKAEKQAG AIQPGSYWYD YRAGFWGVMG GPGLGIIPPF IEELNFPMPE NCAGGTTGVF VNGRELHRKD LELLAGRGLP PDRDRSYIVD
701: ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRCPKRAT

Best Arabidopsis Sequence Match ( AT3G61670.1 )
(BLAST)

001: MADSTKVRLV RCPKCENLLS EPEDSPFFQC GGCFTVLRAK TKEREADSVS VKSVEDTAKP VSASSPEKAI LDSSETSSDS DVPSLRHHHN VVPVDVESDP
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APTIEKLKRG FGMRLPKRTT

Arabidopsis Description

Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q9M371]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.