Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G336000.1 | Wheat | nucleus | 87.24 | 87.34 |
| TraesCS7B01G247600.1 | Wheat | cytosol | 85.95 | 87.28 |
| TraesCS7D01G343700.1 | Wheat | cytosol | 86.65 | 87.16 |
| Os02t0258300-01 | Rice | nucleus | 66.28 | 67.22 |
| Zm00001d053382_P002 | Maize | nucleus | 60.66 | 62.79 |
| Zm00001d016081_P002 | Maize | nucleus | 61.83 | 61.97 |
| KXG29961 | Sorghum | nucleus | 62.65 | 61.92 |
| HORVU0Hr1G021800.1 | Barley | nucleus | 50.35 | 52.76 |
| KRG99688 | Soybean | cytosol | 3.28 | 41.18 |
| GSMUA_Achr7P14150_001 | Banana | nucleus | 36.07 | 40.63 |
| GSMUA_Achr10P... | Banana | nucleus | 35.48 | 38.65 |
| GSMUA_Achr10P... | Banana | cytosol | 35.01 | 38.53 |
| Bra037384.1-P | Field mustard | nucleus | 10.19 | 37.99 |
| GSMUA_Achr10P... | Banana | nucleus | 33.14 | 37.68 |
| VIT_02s0025g01190.t01 | Wine grape | nucleus | 31.73 | 31.92 |
| CDX79176 | Canola | cytosol | 4.22 | 31.86 |
| CDY42041 | Canola | cytosol | 23.07 | 30.5 |
| CDX71720 | Canola | cytosol | 26.11 | 30.14 |
| CDY11373 | Canola | cytosol | 25.53 | 29.74 |
| Bra004541.1-P | Field mustard | nucleus | 23.18 | 29.51 |
| CDX80013 | Canola | nucleus | 22.95 | 29.47 |
| CDY11374 | Canola | cytosol | 25.41 | 29.28 |
| Bra007625.1-P | Field mustard | cytosol | 25.18 | 29.01 |
| AT3G61670.1 | Thale cress | nucleus | 25.88 | 27.97 |
| AT2G46380.1 | Thale cress | nucleus | 25.06 | 27.86 |
| KRH68892 | Soybean | nucleus | 28.92 | 27.32 |
| KRG97141 | Soybean | nucleus | 29.04 | 27.22 |
| CDY15177 | Canola | nucleus | 17.21 | 26.39 |
| VIT_15s0046g01270.t01 | Wine grape | nucleus | 24.12 | 26.38 |
| Bra033264.1-P | Field mustard | nucleus | 17.92 | 26.33 |
| KRH06502 | Soybean | nucleus | 27.17 | 26.01 |
| CDX90032 | Canola | nucleus | 16.98 | 25.89 |
| CDY48504 | Canola | nucleus | 16.74 | 25.4 |
| PGSC0003DMT400032053 | Potato | nucleus | 27.87 | 25.16 |
| KRH47938 | Soybean | nucleus | 26.23 | 25.06 |
| Solyc08g082040.2.1 | Tomato | nucleus | 27.52 | 24.87 |
| CDX91876 | Canola | nucleus | 16.86 | 24.66 |
| CDY67475 | Canola | nucleus | 16.74 | 24.2 |
| Bra000943.1-P | Field mustard | nucleus | 16.98 | 24.17 |
| PGSC0003DMT400000290 | Potato | nucleus | 27.52 | 23.41 |
| Solyc01g095590.2.1 | Tomato | nucleus | 26.35 | 23.27 |
| CDY07174 | Canola | nucleus | 17.21 | 23.11 |
| AT1G01440.1 | Thale cress | nucleus | 17.21 | 22.14 |
| AT4G01090.1 | Thale cress | nucleus | 18.27 | 21.85 |
| HORVU3Hr1G055550.3 | Barley | nucleus | 20.26 | 21.82 |
| HORVU1Hr1G092980.14 | Barley | plastid | 22.01 | 21.44 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G082720.10 | EnsemblPlantsGene:HORVU7Hr1G082720 | InterPro:Zinc_ribbon_12 | ncoils:Coil | PANTHER:PTHR31105 | PANTHER:PTHR31105:SF7 |
| PFAM:PF11331 | SEG:seg | UniParc:UPI000B4617AF | UniProt:A0A287X3Z1 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chrchr7H:+:497338068..497341968
Molecular Weight (calculated)
94065.2 Da
IEP (calculated)
7.073
GRAVY (calculated)
-0.673
Length
854 amino acids
Sequence
(BLAST)
(BLAST)
001: LKESLTPSSM EGEEGSGASC SAAAAEQQVR VVRCPRCEKF LPELPNYSVY VCGGCGATLQ AKKHSSSETC LDKSDVVHVK YLEVLESSPE KKEPVSEANF
101: ETISEENSPR VQATQQERSV PPKMMSEHRD SRCSSGDDQL PREPSTLMFE AMLRDDSTEI REDKYRRIRT EEKGEAKQPV RPSDGTRISV ADTIPPNAYL
201: GEHQMKSGFG DANGSQRAEG NNMDGPSNVS RLEEDRAELL WMLDELRTQV QRSCEITEKP SVGASTSRVA DASSSYSPHE RLSRLRHGSP QVQRNSSQHS
301: PSLSGQTPGI PHAYASVPAH QDLHGYREPV THMGASCYPV GQYPWRNCDG YFFGPHNHDP LVSYHHGGFY HQPACSCLHC HHREFLPVQG APMGFNQHRV
401: PYPGAYPVNG SAMFGMQSNN LRGINASMHR GHMRGNLSKK PPQTCEPIAS GAPFTICYNC YEVLQLPKKY PLLGKDEYKL RCGSCSHAIV VKLDGSRLDV
501: SAPSPISHMS AASKNNSSDV QGSNAYSATD ERLLPLYSFS AGSHCSQERD LHSNSSDTEK VQGISSSSSI FEDENNPARS NSQRGTPGSS DIPLEAQAVS
601: RVPSLPLQHH FGHSPSERVV NGPGKGSRST RSEHEKTVLT ETCRHNTIKD VRVVSVMSLS DDEYEDLGCS QDPGVGTQHV DRPTVTKTGD SFFTNLMKKS
701: FKINNGMGNG RAKVFINGYP ISDRAVKKAE KIAGPIYPGE YWYDYRAGFW GVMGQSCLGM IPPYIPQLNY PMPKNCAGGN TGIFINGREL HQKDFDLLVG
801: RGLSESPDRS YKVEMCGKVY DEVSGEELYC LGKLAPTQCG KKSLMIYVKY CYLL
101: ETISEENSPR VQATQQERSV PPKMMSEHRD SRCSSGDDQL PREPSTLMFE AMLRDDSTEI REDKYRRIRT EEKGEAKQPV RPSDGTRISV ADTIPPNAYL
201: GEHQMKSGFG DANGSQRAEG NNMDGPSNVS RLEEDRAELL WMLDELRTQV QRSCEITEKP SVGASTSRVA DASSSYSPHE RLSRLRHGSP QVQRNSSQHS
301: PSLSGQTPGI PHAYASVPAH QDLHGYREPV THMGASCYPV GQYPWRNCDG YFFGPHNHDP LVSYHHGGFY HQPACSCLHC HHREFLPVQG APMGFNQHRV
401: PYPGAYPVNG SAMFGMQSNN LRGINASMHR GHMRGNLSKK PPQTCEPIAS GAPFTICYNC YEVLQLPKKY PLLGKDEYKL RCGSCSHAIV VKLDGSRLDV
501: SAPSPISHMS AASKNNSSDV QGSNAYSATD ERLLPLYSFS AGSHCSQERD LHSNSSDTEK VQGISSSSSI FEDENNPARS NSQRGTPGSS DIPLEAQAVS
601: RVPSLPLQHH FGHSPSERVV NGPGKGSRST RSEHEKTVLT ETCRHNTIKD VRVVSVMSLS DDEYEDLGCS QDPGVGTQHV DRPTVTKTGD SFFTNLMKKS
701: FKINNGMGNG RAKVFINGYP ISDRAVKKAE KIAGPIYPGE YWYDYRAGFW GVMGQSCLGM IPPYIPQLNY PMPKNCAGGN TGIFINGREL HQKDFDLLVG
801: RGLSESPDRS YKVEMCGKVY DEVSGEELYC LGKLAPTQCG KKSLMIYVKY CYLL
001: MADSTKVRLV RCPKCENLLS EPEDSPFFQC GGCFTVLRAK TKEREADSVS VKSVEDTAKP VSASSPEKAI LDSSETSSDS DVPSLRHHHN VVPVDVESDP
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APT
101: CSKPSSLEQG NRSILLGDKD DLKSQSGRQQ DSGWDRFRKR TTKRCDSQSV INRLSTSRHP CDEGTSSSAN YFPDSLLEFQ KHLKDQSNEA IEQDRAGLLR
201: QLEKIKEQLV QSCNVATDKS KEQAPSSSSA SGLNKAPPMR FHSTGNHAVG GPSYYHQPQF PYNNNNINEA PMHHSLMHPS YGDPHRFPIH GRGPHPYFSG
301: QYVGNNNNGH DLFDAYPQQN GHFHHSSCSC YHCYDNKYWR GSAPVVPDAP YNAGFYPHES VMGFAPPHNP RTYGSRGLQP HGRWPSNFSD AQMDALSRIR
401: PPKVVLSGGS RHIRPLAGGA PFITCQNCFE LLQLPKKPEA GTKKQQKVRC GACSCLIDLS VVNNKFVLST NTASTRQGEA RVAADYTSDD YDLLGYVFHS
501: LDDEPRDLPG LISDKSQDMQ HVHSHSASLS EGELSSDSLT AKPLAEAHEN FVDYSSINHD RSGAGSRSSR SEHDKVTLSK ATAMRQNSMK EVSLASEMEV
601: NFNDYSHRNS GVSKDQQQRA KKSGFASIVK KSFKDLTKSI QNDEGNKSNV SINGHPLTER LLRKAEKQAG VIQPGNYWYD YRAGFWGVMG GPGLGILPPF
701: IEELNYPMPE NCSGGTTGVF VNGRELHRKD LDLLAGRGLP PDRDRSYIVD ITGRVIDEDT GEELDCLGKL APT
Arabidopsis Description
Extra-large G-like protein, putative (DUF3133) [Source:UniProtKB/TrEMBL;Acc:Q9M371]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.