Factsheet for HORVU5Hr1G077580.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU5Hr1G038090.3
HORVU5Hr1G057510.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45920.1	HORVU5Hr1G038090.3	AT1G34430.1	21798944
AT2G45920.1	HORVU5Hr1G057510.3	AT2G46550.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX95679	Canola	cytosol, extracellular, plastid	15.87	23.26
Bra007601.1-P	Field mustard	cytosol	20.11	21.35
HORVU1Hr1G053230.7	Barley	cytosol	22.75	18.07
CDY27349	Canola	cytosol	22.22	15.79
Bra014438.1-P	Field mustard	cytosol	22.75	15.47
CDY37075	Canola	cytosol	21.69	15.41
Bra039304.1-P	Field mustard	cytosol	21.69	15.41
CDY42502	Canola	cytosol	22.22	15.38
Bra004948.1-P	Field mustard	cytosol	22.75	15.14
CDX74775	Canola	cytosol	22.75	15.14
CDX89114	Canola	cytosol	22.75	15.09
CDY18888	Canola	nucleus	22.75	15.09
CDY48922	Canola	cytosol	20.11	13.06
CDX71740	Canola	cytosol	17.99	12.55
AT3G61410.3	Thale cress	cytosol	21.16	12.12
CDX90051	Canola	cytosol	18.52	11.4
CDY15161	Canola	cytosol	17.99	11.11
TraesCS6D01G319000.1	Wheat	cytosol	17.99	11.0
AT1G01680.1	Thale cress	cytosol	17.46	10.71
Bra000412.1-P	Field mustard	cytosol	15.87	10.6
CDX83380	Canola	cytosol	15.87	10.6
Bra003448.1-P	Field mustard	nucleus	21.16	9.43
CDX71741	Canola	nucleus	20.11	9.41
CDY42501	Canola	cytosol	16.93	9.38
Bra014439.1-P	Field mustard	cytosol	16.4	9.09
CDX89113	Canola	cytosol	16.4	9.09
AT2G45920.1	Thale cress	cytosol	19.05	9.0
Bra007600.1-P	Field mustard	cytosol	20.11	8.68
CDY48923	Canola	cytosol	20.11	8.68
HORVU1Hr1G053260.5	Barley	cytosol	18.52	8.64
CDY51567	Canola	nucleus	17.99	8.33
Bra033243.1-P	Field mustard	cytosol, plastid	22.75	8.33
AT3G61390.2	Thale cress	cytosol	18.52	8.05
Bra010318.1-P	Field mustard	cytosol	21.16	7.26
Bra033242.1-P	Field mustard	nucleus	9.52	6.9
Bra033244.1-P	Field mustard	cytosol	19.05	6.74
CDX90050	Canola	nucleus	19.05	6.33
AT1G01660.2	Thale cress	nucleus	18.52	6.15
VIT_00s0772g00010.t01	Wine grape	cytosol	21.16	6.12
CDY15162	Canola	nucleus	16.93	5.63
CDX81289	Canola	cytosol	22.22	5.26
CDY54713	Canola	cytosol	21.16	5.01
Bra037819.1-P	Field mustard	cytosol	21.16	5.01
KRG99475	Soybean	cytosol	21.16	5.01
AT1G01670.1	Thale cress	nucleus	9.52	4.93
CDY14575	Canola	cytosol	20.63	4.89
CDY67215	Canola	cytosol	20.63	4.89
Bra024393.1-P	Field mustard	cytosol	20.63	4.89
AT5G65500.2	Thale cress	cytosol	20.63	4.88
KRH39466	Soybean	cytosol	20.63	4.88
KRH74477	Soybean	cytosol	20.63	4.87
Solyc11g010700.1.1	Tomato	cytosol	16.4	3.88
PGSC0003DMT400041610	Potato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:HORVU5Hr1G077580.3	EnsemblPlantsGene:HORVU5Hr1G077580	Gene3D:3.40.50.620	InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	PANTHER:PTHR27003
PANTHER:PTHR27003:SF81	SEG:seg	UniParc:UPI000B485E63	UniProt:A0A287RWG1	MapMan:35.2	:

Description

No Description!

Coordinates

chrchr5H:-:553497697..553499528

Molecular Weight (calculated)

20475.4 Da

IEP (calculated)

5.850

GRAVY (calculated)

-0.327

Length

189 amino acids

Sequence
(BLAST)

001: MAVVGRARAS LPSSPSSSPL PAFSPWSPQP EVVERMFTRG GSGRSSSSSA SGANRSASLR EIDEEAAILG DDDDAGGGKL YVAVGKDIKD GRSNLVWAAR
101: NLLADDPKLV LLHVHQPADR IMIGLCKVPA SQVEEKELKA YRKIEKEEMN TLLNQYLNFC RVSLKMQAET LVIEKNSPAN GIIELIDQN

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.