Factsheet for AT2G45920.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G61390.2	Thale cress	cytosol	50.5	46.44
AT1G01680.1	Thale cress	cytosol	25.25	32.79
TraesCS6D01G319000.1	Wheat	cytosol	23.25	30.1
AT1G01670.1	Thale cress	nucleus	26.0	28.49
AT3G61410.3	Thale cress	cytosol	22.0	26.67
AT1G01660.2	Thale cress	nucleus	37.25	26.19
Os10t0552400-01	Rice	cytosol	26.5	24.59
Os10t0548850-00	Rice	cytosol	24.75	24.44
HORVU1Hr1G053230.7	Barley	cytosol	14.0	23.53
TraesCS1B01G221500.1	Wheat	cytosol	17.5	23.49
TraesCS1A01G207800.1	Wheat	cytosol	16.75	23.26
TraesCS1D01G211100.1	Wheat	cytosol	17.25	22.62
TraesCS1D01G211200.1	Wheat	cytosol	22.75	22.52
TraesCS1A01G207900.1	Wheat	cytosol	23.5	22.43
HORVU1Hr1G053260.5	Barley	cytosol	22.0	21.73
TraesCS1B01G221900.1	Wheat	cytosol	18.5	21.2
Zm00001d029847_P001	Maize	cytosol	26.75	20.98
AT1G56040.1	Thale cress	cytosol	21.0	20.0
AT1G56030.1	Thale cress	cytosol	19.0	19.44
HORVU5Hr1G077580.3	Barley	plastid	9.0	19.05
OQU92181	Sorghum	endoplasmic reticulum	26.25	18.2
AT5G65500.2	Thale cress	cytosol	26.75	13.39

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	EntrezGene:819200	ProteinID:AAC28533.1	ProteinID:AEC10617.1	EMBL:AK175182
ArrayExpress:AT2G45920	EnsemblPlantsGene:AT2G45920	RefSeq:AT2G45920	TAIR:AT2G45920	RefSeq:AT2G45920-TAIR-G	EnsemblPlants:AT2G45920.1
TAIR:AT2G45920.1	EMBL:BT015764	EMBL:BT020181	ncoils:Coil	GO:GO:0003674	GO:GO:0003824
GO:GO:0004842	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567
GO:GO:0016740	GO:GO:0019538	InterPro:IPR003613	InterPro:IPR013083	RefSeq:NP_182116.2	PFAM:PF04564
PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001078	PO:PO:0001081	PO:PO:0001185
PO:PO:0004507	PO:PO:0007123	PO:PO:0007611	PO:PO:0007616	PO:PO:0008019	PO:PO:0009005
PO:PO:0009009	PO:PO:0009010	PO:PO:0009025	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031
PO:PO:0009032	PO:PO:0009046	PO:PO:0009047	PO:PO:0009052	PO:PO:0020030	PO:PO:0020100
PO:PO:0020137	PO:PO:0025022	PO:PO:0025281	PFscan:PS51698	PANTHER:PTHR27003	PANTHER:PTHR27003:SF52
UniProt:Q683D5	SMART:SM00504	SUPFAM:SSF52402	SUPFAM:SSF57850	UniParc:UPI000034EE9B	InterPro:Ubox_domain
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

PUB37U-box domain-containing protein 37 [Source:UniProtKB/Swiss-Prot;Acc:Q683D5]

Coordinates

chr2:+:18898629..18901303

Molecular Weight (calculated)

46026.7 Da

IEP (calculated)

9.475

GRAVY (calculated)

-0.565

Length

400 amino acids

Sequence
(BLAST)

001: MMGKSGSQQL LMDEKIYVAV GSDLGNKSTL VWAIQNTGGK EFCIVHVHQP LYRKEKEKTQ KILDKYLQKC RQMQVCAEMI HIKMESVEKG IIQLISERNV
101: KKLVMGAASD TRYSMRMADL LSTKAIYIRQ EAPATCCIWF TCKGYLVYKR ESIMGNTSLE YASTSSGQDS VRSRGSVIPS RQFTISRGNG NVYQLAVFEA
201: EKSKKEASLE AFKHQEVVKE KNEAIKRGKE WESAYLEELK QRKETEMELK KVREKLEKMR YISENRITES YMLVQKLQDK YNLATKVLRK AKEERDLLIK
301: GRDIAIIEVE ELRKEVSRSD EHREAPQYFI CPISLEVMKD PQLAADGFTY EAEAISTWLQ GGHETSPMTN TKLHHTKLVP NLALRSAIQE WLHASSSFRK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.