Factsheet for TraesCS1B01G221500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS5A01G119600.1
TraesCS5A01G194900.2
TraesCS5B01G116300.1
TraesCS5B01G190300.1
TraesCS5D01G125900.1
TraesCS5D01G126000.1
TraesCS5D01G198100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45920.1	TraesCS5A01G119600.1	AT1G34430.1	21798944
AT2G45920.1	TraesCS5B01G116300.1	AT1G34430.1	21798944
AT2G45920.1	TraesCS5D01G125900.1	AT1G34430.1	21798944
AT2G45920.1	TraesCS5D01G126000.1	AT1G34430.1	21798944
AT2G45920.1	TraesCS5A01G194900.2	AT2G46550.1	21798944
AT2G45920.1	TraesCS5B01G190300.1	AT2G46550.1	21798944
AT2G45920.1	TraesCS5D01G198100.1	AT2G46550.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G207800.1	Wheat	cytosol	83.89	86.81
TraesCS1D01G211100.1	Wheat	cytosol	85.57	83.61
HORVU1Hr1G053230.7	Barley	cytosol	53.36	66.81
TraesCS1B01G221900.1	Wheat	cytosol	64.09	54.73
Os10t0552400-01	Rice	cytosol	56.38	38.98
Zm00001d029847_P001	Maize	cytosol	55.7	32.55
Bra007601.1-P	Field mustard	cytosol	17.79	29.78
OQU92181	Sorghum	endoplasmic reticulum	56.71	29.29
CDY37075	Canola	cytosol	23.49	26.32
Bra039304.1-P	Field mustard	cytosol	23.49	26.32
CDY27349	Canola	cytosol	22.82	25.56
Bra014438.1-P	Field mustard	cytosol	23.49	25.18
CDX89114	Canola	cytosol	23.83	24.91
CDX74775	Canola	cytosol	23.49	24.65
CDY18888	Canola	nucleus	23.49	24.56
Bra004948.1-P	Field mustard	cytosol	23.15	24.3
CDX95679	Canola	cytosol, extracellular, plastid	10.4	24.03
CDY42502	Canola	cytosol	20.81	22.71
CDY48922	Canola	cytosol	21.14	21.65
CDX71740	Canola	cytosol	19.46	21.4
AT1G01680.1	Thale cress	cytosol	20.81	20.13
Bra003448.1-P	Field mustard	nucleus	26.85	18.87
CDX71741	Canola	nucleus	25.17	18.56
AT3G61410.3	Thale cress	cytosol	20.47	18.48
CDX90051	Canola	cytosol	18.46	17.92
CDY51567	Canola	nucleus	24.5	17.89
Bra014439.1-P	Field mustard	cytosol	20.47	17.89
CDX89113	Canola	cytosol	20.47	17.89
CDY42501	Canola	cytosol	20.47	17.89
CDY15161	Canola	cytosol	18.12	17.65
AT2G45920.1	Thale cress	cytosol	23.49	17.5
AT3G61390.2	Thale cress	cytosol	25.17	17.24
CDY48923	Canola	cytosol	25.17	17.12
Bra007600.1-P	Field mustard	cytosol	25.17	17.12
CDX83380	Canola	cytosol	16.11	16.96
Bra000412.1-P	Field mustard	cytosol	16.11	16.96
Bra033242.1-P	Field mustard	nucleus	14.43	16.48
Bra033243.1-P	Field mustard	cytosol, plastid	26.51	15.31
AT1G01670.1	Thale cress	nucleus	18.46	15.07
AT1G01660.2	Thale cress	nucleus	26.17	13.71
Bra033244.1-P	Field mustard	cytosol	24.5	13.67
CDX90050	Canola	nucleus	25.84	13.53
CDY15162	Canola	nucleus	24.83	13.03
Bra010318.1-P	Field mustard	cytosol	21.81	11.8
VIT_00s0772g00010.t01	Wine grape	cytosol	22.48	10.24
KRH39466	Soybean	cytosol	23.15	8.62
KRH74477	Soybean	cytosol	22.48	8.36
KRG99475	Soybean	cytosol	21.48	8.02
AT5G65500.2	Thale cress	cytosol	21.14	7.88
Bra024393.1-P	Field mustard	cytosol	20.81	7.77
CDX81289	Canola	cytosol	20.81	7.76
CDY14575	Canola	cytosol	20.47	7.64
CDY67215	Canola	cytosol	20.47	7.64
Bra037819.1-P	Field mustard	cytosol	20.13	7.52
CDY54713	Canola	cytosol	20.13	7.52
Solyc11g010700.1.1	Tomato	cytosol	15.77	5.89
PGSC0003DMT400041610	Potato	cytosol	3.69	2.11

Protein Annotations

EnsemblPlants:TraesCS1B01G221500.1	EnsemblPlantsGene:TraesCS1B01G221500	Gene3D:3.40.50.620	InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	ncoils:Coil
PANTHER:PTHR27003	PANTHER:PTHR27003:SF1	SEG:seg	SUPFAM:SSF52402	TIGR:cd01989	MapMan:35.1

Description

No Description!

Coordinates

chr1B:-:398383614..398387612

Molecular Weight (calculated)

33676.4 Da

IEP (calculated)

5.850

GRAVY (calculated)

-0.503

Length

298 amino acids

Sequence
(BLAST)

001: MEAAEEEKVF VAVPAEPRAG QSTLAWALRH LYGGAATTTI IVTHVHVPSQ MIPIMGVKFH ADKLSPEPVR AFRRAERERA DEMLDDYIHQ CSQIKVKCER
101: LVIEKEDAAS GLVELIRLHR ITKLVIAAAA DRHYSRKLDK PVSKTATEIM QRADPSCKIW FVCKEQLVCT RDKEVQIAPL AVAAPLLPIL GHEVQHLQSP
201: QGEGDTEMEP SFDDELEEAR KAVEELMRRA LKESRRRQQA EEEMAASLQK AQEHEELYLE EVKKREELEA ALARADREIA QLRQAIQRNA PGEASRGD

Best Arabidopsis Sequence Match ( AT2G45910.1 )
(BLAST)

001: MALVSPIPAM GERAGSMRFH GIGSPGSRSS RSGIMDEPVS RLIDEKIFVA VDKHVAKSKS TLIWALQNTG GKKICLIHVH QPSQMIPLMG AKFPVGAVKE
101: EEVRVFREKE REKVHMILDD YLRICQQRGV RAEKMFIEME SIENGIVQLI SELGIRKLVM GAAADRHYSR RMTDLKSRKA IFVRREAPTL CQIWFTCKGY
201: LIHTREATMD DTESEYASPR PSISASDLLQ TFSTPESEHQ HISRVQSTDS VQQLVSNGSS TEQSGRVSDG SLNTDEEERE SDGSEVTGSA TVMSSGHSSP
301: SSFPDGVDDS FNVKIRKATS EAHSSKQEAF AETLRRQKAE KNALDAIRRA KQSESAYSEE LKRRKDTEIA VAKEKERFIT IKNEQEVIME ELQSAMAQKA
401: MLESQIAKSD GTMEKLNQKL DIAVKLLQKL RDEREELQTE RDRALREAEE LRSHAETSTL QLPQYFTDFS FSEIEEATNH FDSTLKIGEG GYGSIYVGLL
501: RHTQVAIKML NPNSSQGPVE YQQEVDVLSK MRHPNIITLI GACPEGWSLV YEYLPGGSLE DRLTCKDNSP PLSWQNRVRI ATEICAALVF LHSNKAHSLV
601: HGDLKPANIL LDSNLVSKLS DFGTCSLLHP NGSKSVRTDV TGTVAYLDPE ASSSGELTPK SDVYSFGIIL LRLLTGRPAL RISNEVKYAL DNGTLNDLLD
701: PLAGDWPFVQ AEQLARLALR CCETVSENRP DLGTEVWRVL EPMRASSGGS SSFHLGRNEH RIAPPYFICP IFQEVMQDPH VAADGFTYEA EAIRAWLDSE
801: HDTSPMTNVK LSHTSLIANH ALRSAIQEWL QHHL

Arabidopsis Description

PUB33U-box domain-containing protein 33 [Source:UniProtKB/Swiss-Prot;Acc:Q8GUH1]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.