Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48922 | Canola | cytosol | 93.73 | 87.29 |
| Bra007601.1-P | Field mustard | cytosol | 52.77 | 80.34 |
| CDX89114 | Canola | cytosol | 56.09 | 53.33 |
| CDY42502 | Canola | cytosol | 51.66 | 51.28 |
| CDY27349 | Canola | cytosol | 45.39 | 46.24 |
| CDY37075 | Canola | cytosol | 44.28 | 45.11 |
| AT3G61410.3 | Thale cress | cytosol | 54.61 | 44.85 |
| CDX74775 | Canola | cytosol | 41.33 | 39.44 |
| CDY18888 | Canola | nucleus | 40.96 | 38.95 |
| HORVU1Hr1G053230.7 | Barley | cytosol | 21.77 | 24.79 |
| TraesCS6D01G319000.1 | Wheat | cytosol | 23.62 | 20.71 |
| TraesCS1A01G207800.1 | Wheat | cytosol | 21.77 | 20.49 |
| CDY42501 | Canola | cytosol | 25.46 | 20.23 |
| CDX83380 | Canola | cytosol | 20.66 | 19.79 |
| CDY15161 | Canola | cytosol | 22.14 | 19.61 |
| TraesCS1B01G221500.1 | Wheat | cytosol | 21.4 | 19.46 |
| CDX95679 | Canola | cytosol, extracellular, plastid | 9.23 | 19.38 |
| CDX89113 | Canola | cytosol | 24.35 | 19.35 |
| TraesCS1D01G211100.1 | Wheat | cytosol | 21.77 | 19.34 |
| CDX90051 | Canola | cytosol | 21.77 | 19.22 |
| CDX71741 | Canola | nucleus | 27.31 | 18.32 |
| HORVU5Hr1G077580.3 | Barley | plastid | 12.55 | 17.99 |
| TraesCS1B01G221900.1 | Wheat | cytosol | 22.88 | 17.77 |
| CDY48923 | Canola | cytosol | 27.31 | 16.89 |
| CDY51567 | Canola | nucleus | 24.72 | 16.42 |
| TraesCS1D01G211200.1 | Wheat | cytosol | 24.35 | 16.34 |
| TraesCS1A01G207900.1 | Wheat | cytosol | 25.09 | 16.23 |
| HORVU1Hr1G053260.5 | Barley | cytosol | 22.88 | 15.31 |
| Os10t0552400-01 | Rice | cytosol | 23.62 | 14.85 |
| Os10t0548850-00 | Rice | cytosol | 20.3 | 13.58 |
| Zm00001d029847_P001 | Maize | cytosol | 23.99 | 12.75 |
| CDX90050 | Canola | nucleus | 23.25 | 11.07 |
| OQU92181 | Sorghum | endoplasmic reticulum | 23.25 | 10.92 |
| CDY15162 | Canola | nucleus | 22.88 | 10.92 |
| CDY58794 | Canola | nucleus | 5.9 | 9.82 |
| CDX81289 | Canola | cytosol | 17.71 | 6.01 |
| CDY67215 | Canola | cytosol | 17.34 | 5.89 |
| CDY54713 | Canola | cytosol | 17.34 | 5.89 |
| CDY14575 | Canola | cytosol | 16.97 | 5.76 |
| CDY08273 | Canola | cytosol | 10.33 | 5.65 |
| CDY26075 | Canola | cytosol | 10.33 | 5.58 |
Protein Annotations
| EnsemblPlants:CDX71740 | EnsemblPlantsGene:GSBRNA2T00155438001 | PANTHER:PTHR31964 | PANTHER:PTHR31964:SF43 | ProteinID:CDX71740 | ProteinID:CDX71740.1 |
| SEG:seg | UniParc:UPI0004EE93C6 | MapMan:35.1 | : | : | : |
Description
BnaC08g31340D
Coordinates
chrLK031795:-:268245..269893
Molecular Weight (calculated)
29861.0 Da
IEP (calculated)
8.490
GRAVY (calculated)
-0.339
Length
271 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKEEAAAAV MEEVIYVAVG RETAKNKSNL TWAIDNSQGN KICIVLVHQP PHMIPVLGTR FDAATVDEEL VIAYREKQKA KTDKILDEYL RICLKKGVHA
101: EKLCLIMGAT ADKHYSTKME ELRSRKAIFV CQHASPTCCI RFICKGHLIH TRLKGRMDEV RALSALLSDF QRLVSSRSSS NSDMLSGSSK AKSEVEEEEG
201: TSRTSSSRSV GTLSYSGGSE ASPSVTEDKS NHSSPPPSLP CTGMGLGMIS ILIHSTKLWH KRAIQNHKLC E
101: EKLCLIMGAT ADKHYSTKME ELRSRKAIFV CQHASPTCCI RFICKGHLIH TRLKGRMDEV RALSALLSDF QRLVSSRSSS NSDMLSGSSK AKSEVEEEEG
201: TSRTSSSRSV GTLSYSGGSE ASPSVTEDKS NHSSPPPSLP CTGMGLGMIS ILIHSTKLWH KRAIQNHKLC E
001: MEEKEEAGVM DERIYVALGR EIANNKSNLA WVLDNCQGNK ICIVLVHRPP QMIPVLGTKF DAATVDEELV RAYREKQKAK TDKILDEYLR ICLRKGVQAE
101: KLCVEMNSIE KGIVQMISEN KVRKFIMGAA SDKHFSTKME DLRSKKAIFV CQQASATCHI RFTCKGYLIH TREARMDEVR ALSALLSDFQ RLVTSQSSAN
201: LDQDSGGSKR KSEHEEGEEE ERTSRTSSSR SASTLSYFGG SEASSSVSVM EEISNRSSPP SLPCSGMGLG MITFLINSTK LWQRLAIQNH KHCE
101: KLCVEMNSIE KGIVQMISEN KVRKFIMGAA SDKHFSTKME DLRSKKAIFV CQQASATCHI RFTCKGYLIH TREARMDEVR ALSALLSDFQ RLVTSQSSAN
201: LDQDSGGSKR KSEHEEGEEE ERTSRTSSSR SASTLSYFGG SEASSSVSVM EEISNRSSPP SLPCSGMGLG MITFLINSTK LWQRLAIQNH KHCE
Arabidopsis Description
U-box kinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ28]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.