CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra014438.1-P	Field mustard	cytosol	97.19	99.64
CDY42502	Canola	cytosol	82.11	85.71
CDY48922	Canola	cytosol	60.0	58.76
CDX71740	Canola	cytosol	53.33	56.09
CDY27349	Canola	cytosol	49.82	53.38
CDY37075	Canola	cytosol	48.07	51.5
AT3G61410.3	Thale cress	cytosol	56.49	48.79
CDX74775	Canola	cytosol	46.67	46.83
CDY18888	Canola	nucleus	45.26	45.26
HORVU1Hr1G053230.7	Barley	cytosol	24.21	28.99
CDY42501	Canola	cytosol	30.53	25.51
CDX95679	Canola	cytosol, extracellular, plastid	11.23	24.81
CDX89113	Canola	cytosol	29.47	24.63
TraesCS1A01G207800.1	Wheat	cytosol	24.56	24.31
TraesCS1B01G221500.1	Wheat	cytosol	24.91	23.83
CDX83380	Canola	cytosol	23.51	23.67
TraesCS1D01G211100.1	Wheat	cytosol	25.26	23.61
CDY15161	Canola	cytosol	24.91	23.2
CDX71741	Canola	nucleus	32.63	23.02
HORVU5Hr1G077580.3	Barley	plastid	15.09	22.75
TraesCS6D01G319000.1	Wheat	cytosol	24.56	22.65
CDY48923	Canola	cytosol	34.04	22.15
CDX90051	Canola	cytosol	23.51	21.82
CDY51567	Canola	nucleus	30.88	21.57
TraesCS1B01G221900.1	Wheat	cytosol	25.96	21.2
TraesCS1D01G211200.1	Wheat	cytosol	26.67	18.81
TraesCS1A01G207900.1	Wheat	cytosol	27.02	18.38
HORVU1Hr1G053260.5	Barley	cytosol	24.91	17.53
Os10t0552400-01	Rice	cytosol	25.61	16.94
Os10t0548850-00	Rice	cytosol	21.4	15.06
Zm00001d029847_P001	Maize	cytosol	26.67	14.9
CDX90050	Canola	nucleus	25.61	12.83
CDY15162	Canola	nucleus	24.91	12.5
OQU92181	Sorghum	endoplasmic reticulum	24.21	11.96
CDY58794	Canola	nucleus	5.61	9.82
CDX81289	Canola	cytosol	22.11	7.88
CDY54713	Canola	cytosol	21.4	7.64
CDY67215	Canola	cytosol	19.65	7.02
CDY14575	Canola	cytosol	19.3	6.89
CDY08273	Canola	cytosol	11.23	6.45
CDY26075	Canola	cytosol	11.23	6.37

Protein Annotations

EnsemblPlants:CDX89114	EnsemblPlantsGene:GSBRNA2T00149252001	Gene3D:3.40.50.620	InterPro:IPR014729	InterPro:Rossmann-like_a/b/a_fold	ncoils:Coil
PANTHER:PTHR31964	PANTHER:PTHR31964:SF43	ProteinID:CDX89114	ProteinID:CDX89114.1	SEG:seg	UniParc:UPI0004EF09E4
MapMan:35.1	:	:	:	:	:

Description

BnaA04g00720D

Coordinates

chrLK031857:+:1111166..1112826

Molecular Weight (calculated)

31783.8 Da

IEP (calculated)

5.856

GRAVY (calculated)

-0.422

Length

285 amino acids

Sequence
(BLAST)

001: MEFQGARENN MEEEEEAAEE RIYVAVGSET AKNKSNLTWA IDNSEGRKIC IVLVHQPAQM IPVLGTKFHA ATVDEELVRA YREKEKAKAD KILDEYLRIC
101: LQKRVHAEKL CVEMDSIEKG IVQMISQNRV KKFVMGAAAD KHYSTKMVDL RSRKAIFVCQ QASVTCHIRF VCKGHLIHTR EPIINEGEEE EERISRTSSC
201: RSASTSSYYG GSEASSSIDE ASSSIDEASS SIDEVSSIIT EETISNHSPP PSLPCSGMGL GMITFLINST KLLHRLAIQN QKQPE

Best Arabidopsis Sequence Match ( AT3G61410.1 )
(BLAST)

001: MEEKEEAGVM DERIYVALGR EIANNKSNLA WVLDNCQGNK ICIVLVHRPP QMIPVLGTKF DAATVDEELV RAYREKQKAK TDKILDEYLR ICLRKGVQAE
101: KLCVEMNSIE KGIVQMISEN KVRKFIMGAA SDKHFSTKME DLRSKKAIFV CQQASATCHI RFTCKGYLIH TREARMDEVR ALSALLSDFQ RLVTSQSSAN
201: LDQDSGGSKR KSEHEEGEEE ERTSRTSSSR SASTLSYFGG SEASSSVSVM EEISNRSSPP SLPCSGMGLG MITFLINSTK LWQRLAIQNH KHCE

Arabidopsis Description

U-box kinase family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LQ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.