Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU92181 | Sorghum | endoplasmic reticulum | 66.27 | 58.58 |
| TraesCS1D01G211100.1 | Wheat | cytosol | 33.33 | 55.74 |
| TraesCS1B01G221500.1 | Wheat | cytosol | 32.55 | 55.7 |
| TraesCS1A01G207800.1 | Wheat | cytosol | 31.37 | 55.56 |
| HORVU1Hr1G053230.7 | Barley | cytosol | 25.88 | 55.46 |
| Os10t0552400-01 | Rice | cytosol | 46.86 | 55.45 |
| TraesCS1B01G221900.1 | Wheat | cytosol | 34.31 | 50.14 |
| TraesCS1A01G207900.1 | Wheat | cytosol | 39.61 | 48.21 |
| HORVU1Hr1G053260.5 | Barley | cytosol | 37.65 | 47.41 |
| TraesCS1D01G211200.1 | Wheat | cytosol | 37.25 | 47.03 |
| Bra007601.1-P | Field mustard | cytosol | 11.37 | 32.58 |
| CDX89113 | Canola | cytosol | 20.2 | 30.21 |
| Bra014439.1-P | Field mustard | cytosol | 20.2 | 30.21 |
| CDY15161 | Canola | cytosol | 17.65 | 29.41 |
| CDY42501 | Canola | cytosol | 19.61 | 29.33 |
| AT1G01680.1 | Thale cress | cytosol | 17.45 | 28.9 |
| Bra033242.1-P | Field mustard | nucleus | 14.71 | 28.74 |
| CDX90051 | Canola | cytosol | 17.25 | 28.66 |
| Bra000412.1-P | Field mustard | cytosol | 15.69 | 28.27 |
| CDX83380 | Canola | cytosol | 15.69 | 28.27 |
| Bra039304.1-P | Field mustard | cytosol | 14.71 | 28.2 |
| CDY37075 | Canola | cytosol | 14.71 | 28.2 |
| CDY27349 | Canola | cytosol | 14.31 | 27.44 |
| Bra007600.1-P | Field mustard | cytosol | 23.33 | 27.17 |
| Bra014438.1-P | Field mustard | cytosol | 14.71 | 26.98 |
| CDY48923 | Canola | cytosol | 23.14 | 26.94 |
| AT2G45920.1 | Thale cress | cytosol | 20.98 | 26.75 |
| CDX89114 | Canola | cytosol | 14.9 | 26.67 |
| AT3G61390.2 | Thale cress | cytosol | 22.35 | 26.21 |
| CDY51567 | Canola | nucleus | 20.78 | 25.98 |
| CDY18888 | Canola | nucleus | 14.51 | 25.96 |
| Bra003448.1-P | Field mustard | nucleus | 20.78 | 25.0 |
| CDX74775 | Canola | cytosol | 13.73 | 24.65 |
| Bra004948.1-P | Field mustard | cytosol | 13.73 | 24.65 |
| CDY48922 | Canola | cytosol | 13.92 | 24.4 |
| AT1G01670.1 | Thale cress | nucleus | 17.45 | 24.38 |
| CDX71740 | Canola | cytosol | 12.75 | 23.99 |
| CDY42502 | Canola | cytosol | 12.75 | 23.81 |
| CDX71741 | Canola | nucleus | 17.65 | 22.28 |
| CDX90050 | Canola | nucleus | 24.51 | 21.97 |
| CDY15162 | Canola | nucleus | 24.31 | 21.83 |
| Bra033244.1-P | Field mustard | cytosol | 22.75 | 21.72 |
| CDX95679 | Canola | cytosol, extracellular, plastid | 5.49 | 21.71 |
| AT1G01660.2 | Thale cress | nucleus | 24.12 | 21.62 |
| AT3G61410.3 | Thale cress | cytosol | 13.92 | 21.52 |
| Bra033243.1-P | Field mustard | cytosol, plastid | 20.0 | 19.77 |
| Zm00001d050296_P001 | Maize | plastid | 9.8 | 19.68 |
| Zm00001d049695_P001 | Maize | mitochondrion | 10.78 | 17.74 |
| Bra010318.1-P | Field mustard | cytosol | 18.82 | 17.42 |
| KRH74477 | Soybean | cytosol | 21.37 | 13.61 |
| CDY14575 | Canola | cytosol | 21.18 | 13.53 |
| KRH39466 | Soybean | cytosol | 20.98 | 13.38 |
| CDY67215 | Canola | cytosol | 20.59 | 13.16 |
| Bra024393.1-P | Field mustard | cytosol | 20.59 | 13.16 |
| AT5G65500.2 | Thale cress | cytosol | 20.39 | 13.02 |
| CDY54713 | Canola | cytosol | 20.2 | 12.91 |
| CDX81289 | Canola | cytosol | 20.2 | 12.89 |
| Bra037819.1-P | Field mustard | cytosol | 20.0 | 12.78 |
| VIT_00s0772g00010.t01 | Wine grape | cytosol | 16.27 | 12.69 |
| KRG99475 | Soybean | cytosol | 19.41 | 12.41 |
| PGSC0003DMT400041610 | Potato | cytosol | 11.76 | 11.52 |
| Solyc11g010700.1.1 | Tomato | cytosol | 13.14 | 8.4 |
Protein Annotations
| MapMan:35.1 | UniProt:A0A1D6K831 | ncoils:Coil | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 |
| GO:GO:0019538 | InterPro:IPR003613 | ProteinID:ONL99697.1 | PFAM:PF04564 | PFscan:PS51698 | PANTHER:PTHR22849 |
| PANTHER:PTHR22849:SF59 | SMART:SM00504 | SUPFAM:SSF57850 | UniParc:UPI000220D350 | InterPro:Ubox_domain | EnsemblPlantsGene:Zm00001d029847 |
| EnsemblPlants:Zm00001d029847_P001 | EnsemblPlants:Zm00001d029847_T001 | SEG:seg | : | : | : |
Description
U-box domain-containing protein 37
Coordinates
chr1:-:89925889..89928127
Molecular Weight (calculated)
56791.7 Da
IEP (calculated)
5.752
GRAVY (calculated)
-0.360
Length
510 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAVVDKVF VALPAEVKAG QSTLAWALDR FGGGGGGRTT VVIAHVHVPP QMIPVMGVKF HSSKLSPEQV KLFRRIEHER VDKQLDGYVR QCSKMKVKCE
101: KLVFEKDDVV AGLVELVVLH KVTRLVIAAA ADRQYSRKMD RPKCRTATEI MQRADPSCKI WFVCKGQLIC TRGVEEEVAP SATPFVPDDL DHQALQLVVS
201: HQKEDEAKSE LGLYDELKEA CIAAENLMKR ALNESSRRQK ADGEVASALQ KAKEYQELYF EETRKREELE GALARAHREI ARLMQAKQVF VVERNTAADE
301: LQEAMSERSS LEGHDVDEDA VLRTAGGQAT EQQEEEEEHV QTQHDLGTGE RDLELEARLN QSKLAAFSPS SVIQSPYDED RVPACFLCPI LQVWVLALHP
401: PQALSTVHAW RSCLNVVEFT YMQEPMRDPH VAADGFTYEG DAIRGWLDGG NGASPVTGQP LAHRELAPNL ALGAVIQDYT VMRRRQCRFC DSHDGVAALQ
501: FFPSPVGCQR
101: KLVFEKDDVV AGLVELVVLH KVTRLVIAAA ADRQYSRKMD RPKCRTATEI MQRADPSCKI WFVCKGQLIC TRGVEEEVAP SATPFVPDDL DHQALQLVVS
201: HQKEDEAKSE LGLYDELKEA CIAAENLMKR ALNESSRRQK ADGEVASALQ KAKEYQELYF EETRKREELE GALARAHREI ARLMQAKQVF VVERNTAADE
301: LQEAMSERSS LEGHDVDEDA VLRTAGGQAT EQQEEEEEHV QTQHDLGTGE RDLELEARLN QSKLAAFSPS SVIQSPYDED RVPACFLCPI LQVWVLALHP
401: PQALSTVHAW RSCLNVVEFT YMQEPMRDPH VAADGFTYEG DAIRGWLDGG NGASPVTGQP LAHRELAPNL ALGAVIQDYT VMRRRQCRFC DSHDGVAALQ
501: FFPSPVGCQR
001: MTLKIPIQEM VKMVGSLRSH GIDIPESMEI NKKEKIYVAV TEKDLESKSS LVWAIQNSGG KEFCIVHVHQ PIPGEMFHEQ KLRLYRKEKD KAHKNSEKYL
101: QICRQMQVTA EIIYIETDSV EKGILQLISQ RGVTKLVMGA AADRHYSMRM RDLKSKKAIY IHREAPATCL IWFTCNGYLI CSREARRANN LYLECASSNS
201: LSQSDITRGT ESIVKDDDHL IKLAVTEAEA SKRKARFEAC KREEAEKTAV DALKKAKQWE NVYFEELKQR KETEKALRKR NDELEKMRSE SETQITESYT
301: VIRKLQEKNN LSMETFRGIR EEQEELKIKL REVSKLKGKR EEEEASTSNH REPPQYFICP ITHDIMEDPH VAADGFTYEG EAISRWFERG HETSPMINKR
401: LPHTSLVPNL ALRSAIQEWL QLRELLNRPS ACREI
101: QICRQMQVTA EIIYIETDSV EKGILQLISQ RGVTKLVMGA AADRHYSMRM RDLKSKKAIY IHREAPATCL IWFTCNGYLI CSREARRANN LYLECASSNS
201: LSQSDITRGT ESIVKDDDHL IKLAVTEAEA SKRKARFEAC KREEAEKTAV DALKKAKQWE NVYFEELKQR KETEKALRKR NDELEKMRSE SETQITESYT
301: VIRKLQEKNN LSMETFRGIR EEQEELKIKL REVSKLKGKR EEEEASTSNH REPPQYFICP ITHDIMEDPH VAADGFTYEG EAISRWFERG HETSPMINKR
401: LPHTSLVPNL ALRSAIQEWL QLRELLNRPS ACREI
Arabidopsis Description
PUB36U-box domain-containing protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ84]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.