Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX89113 | Canola | cytosol | 53.33 | 68.04 |
| Bra014439.1-P | Field mustard | cytosol | 52.87 | 67.45 |
| CDY42501 | Canola | cytosol | 52.18 | 66.57 |
| Bra007600.1-P | Field mustard | cytosol | 62.99 | 62.56 |
| CDY48923 | Canola | cytosol | 62.3 | 61.87 |
| Bra003448.1-P | Field mustard | nucleus | 57.47 | 58.96 |
| CDY51567 | Canola | nucleus | 52.41 | 55.88 |
| CDX71741 | Canola | nucleus | 51.49 | 55.45 |
| AT2G45920.1 | Thale cress | cytosol | 46.44 | 50.5 |
| AT1G01680.1 | Thale cress | cytosol | 23.91 | 33.77 |
| TraesCS6D01G319000.1 | Wheat | cytosol | 21.15 | 29.77 |
| AT1G01670.1 | Thale cress | nucleus | 23.45 | 27.95 |
| AT1G01660.2 | Thale cress | nucleus | 34.25 | 26.19 |
| Os10t0548850-00 | Rice | cytosol | 24.14 | 25.93 |
| Os10t0552400-01 | Rice | cytosol | 25.52 | 25.75 |
| TraesCS1A01G207800.1 | Wheat | cytosol | 16.78 | 25.35 |
| TraesCS1B01G221500.1 | Wheat | cytosol | 17.24 | 25.17 |
| TraesCS1D01G211100.1 | Wheat | cytosol | 17.24 | 24.59 |
| AT3G61410.3 | Thale cress | cytosol | 18.39 | 24.24 |
| TraesCS1D01G211200.1 | Wheat | cytosol | 22.3 | 24.01 |
| TraesCS1A01G207900.1 | Wheat | cytosol | 22.76 | 23.63 |
| HORVU1Hr1G053230.7 | Barley | cytosol | 12.87 | 23.53 |
| HORVU1Hr1G053260.5 | Barley | cytosol | 20.92 | 22.47 |
| AT1G56040.1 | Thale cress | cytosol | 21.61 | 22.38 |
| Zm00001d029847_P001 | Maize | cytosol | 26.21 | 22.35 |
| TraesCS1B01G221900.1 | Wheat | cytosol | 17.7 | 22.06 |
| AT1G56030.1 | Thale cress | cytosol | 18.39 | 20.46 |
| OQU92181 | Sorghum | endoplasmic reticulum | 25.29 | 19.06 |
| HORVU5Hr1G077580.3 | Barley | plastid | 8.05 | 18.52 |
| AT5G65500.2 | Thale cress | cytosol | 22.53 | 12.27 |
Protein Annotations
| Gene3D:3.30.40.10 | Gene3D:3.40.50.620 | MapMan:35.1 | EntrezGene:825311 | ProteinID:AEE80195.1 | EMBL:AK117154 |
| EMBL:AL132962 | ProteinID:ANM63721.1 | ArrayExpress:AT3G61390 | EnsemblPlantsGene:AT3G61390 | RefSeq:AT3G61390 | TAIR:AT3G61390 |
| RefSeq:AT3G61390-TAIR-G | EnsemblPlants:AT3G61390.2 | TAIR:AT3G61390.2 | EMBL:BT005367 | ProteinID:CAB71069.1 | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004842 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0009987 | GO:GO:0016567 | GO:GO:0016740 | GO:GO:0019538 | InterPro:IPR003613 | InterPro:IPR013083 |
| InterPro:IPR014729 | RefSeq:NP_001325793.1 | RefSeq:NP_191698.2 | PFAM:PF04564 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020038 |
| PO:PO:0020137 | PO:PO:0025022 | PFscan:PS51698 | PANTHER:PTHR27003 | PANTHER:PTHR27003:SF52 | UniProt:Q8GZ84 |
| InterPro:Rossmann-like_a/b/a_fold | SMART:SM00504 | SUPFAM:SSF52402 | SUPFAM:SSF57850 | UniParc:UPI0000197089 | InterPro:Ubox_domain |
| InterPro:Znf_RING/FYVE/PHD | : | : | : | : | : |
Description
PUB36U-box domain-containing protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ84]
Coordinates
chr3:+:22716238..22718490
Molecular Weight (calculated)
50515.7 Da
IEP (calculated)
8.456
GRAVY (calculated)
-0.705
Length
435 amino acids
Sequence
(BLAST)
(BLAST)
001: MTLKIPIQEM VKMVGSLRSH GIDIPESMEI NKKEKIYVAV TEKDLESKSS LVWAIQNSGG KEFCIVHVHQ PIPGEMFHEQ KLRLYRKEKD KAHKNSEKYL
101: QICRQMQVTA EIIYIETDSV EKGILQLISQ RGVTKLVMGA AADRHYSMRM RDLKSKKAIY IHREAPATCL IWFTCNGYLI CSREARRANN LYLECASSNS
201: LSQSDITRGT ESIVKDDDHL IKLAVTEAEA SKRKARFEAC KREEAEKTAV DALKKAKQWE NVYFEELKQR KETEKALRKR NDELEKMRSE SETQITESYT
301: VIRKLQEKNN LSMETFRGIR EEQEELKIKL REVSKLKGKR EEEEASTSNH REPPQYFICP ITHDIMEDPH VAADGFTYEG EAISRWFERG HETSPMINKR
401: LPHTSLVPNL ALRSAIQEWL QLRELLNRPS ACREI
101: QICRQMQVTA EIIYIETDSV EKGILQLISQ RGVTKLVMGA AADRHYSMRM RDLKSKKAIY IHREAPATCL IWFTCNGYLI CSREARRANN LYLECASSNS
201: LSQSDITRGT ESIVKDDDHL IKLAVTEAEA SKRKARFEAC KREEAEKTAV DALKKAKQWE NVYFEELKQR KETEKALRKR NDELEKMRSE SETQITESYT
301: VIRKLQEKNN LSMETFRGIR EEQEELKIKL REVSKLKGKR EEEEASTSNH REPPQYFICP ITHDIMEDPH VAADGFTYEG EAISRWFERG HETSPMINKR
401: LPHTSLVPNL ALRSAIQEWL QLRELLNRPS ACREI
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.