Factsheet for Os10t0552400-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
mitochondrion 2
cytosol 3
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os08t0400300-01
Os09t0363500-01
Os12t0182200-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G45920.1	Os12t0182200-01	AT1G34430.1	21798944
AT2G45920.1	Os08t0400300-01	AT2G46550.1	21798944
AT2G45920.1	Os09t0363500-01	AT2G46550.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G207800.1	Wheat	cytosol	38.98	58.33
TraesCS1B01G221500.1	Wheat	cytosol	38.98	56.38
TraesCS1D01G211100.1	Wheat	cytosol	39.68	56.07
HORVU1Hr1G053230.7	Barley	cytosol	30.16	54.62
TraesCS1B01G221900.1	Wheat	cytosol	43.39	53.58
Os10t0548850-00	Rice	cytosol	47.1	50.12
TraesCS1D01G211200.1	Wheat	cytosol	46.4	49.51
TraesCS1A01G207900.1	Wheat	cytosol	47.1	48.45
HORVU1Hr1G053260.5	Barley	cytosol	45.24	48.15
Zm00001d029847_P001	Maize	cytosol	55.45	46.86
OQU92181	Sorghum	endoplasmic reticulum	58.0	43.33
Bra007601.1-P	Field mustard	cytosol	12.3	29.78
Bra014439.1-P	Field mustard	cytosol	22.74	28.74
CDX89113	Canola	cytosol	22.74	28.74
Bra033242.1-P	Field mustard	nucleus	17.4	28.74
CDY42501	Canola	cytosol	22.27	28.15
CDX90051	Canola	cytosol	19.49	27.36
AT1G01680.1	Thale cress	cytosol	19.26	26.95
CDY15161	Canola	cytosol	19.03	26.8
AT2G45920.1	Thale cress	cytosol	24.59	26.5
CDY37075	Canola	cytosol	16.24	26.32
Bra039304.1-P	Field mustard	cytosol	16.24	26.32
CDX74775	Canola	cytosol	17.17	26.06
CDY51567	Canola	nucleus	24.59	25.98
CDY27349	Canola	cytosol	16.01	25.94
Bra004948.1-P	Field mustard	cytosol	16.94	25.7
CDX89114	Canola	cytosol	16.94	25.61
Bra007600.1-P	Field mustard	cytosol	25.99	25.57
CDY48923	Canola	cytosol	25.99	25.57
Bra014438.1-P	Field mustard	cytosol	16.47	25.54
AT3G61390.2	Thale cress	cytosol	25.75	25.52
Bra003448.1-P	Field mustard	nucleus	25.06	25.47
CDX83380	Canola	cytosol	16.71	25.44
Bra000412.1-P	Field mustard	cytosol	16.71	25.44
CDY18888	Canola	nucleus	16.71	25.26
AT1G01670.1	Thale cress	nucleus	20.19	23.84
CDY48922	Canola	cytosol	16.01	23.71
CDX71740	Canola	cytosol	14.85	23.62
CDY42502	Canola	cytosol	14.85	23.44
CDX71741	Canola	nucleus	21.58	23.02
Bra033244.1-P	Field mustard	cytosol	27.84	22.47
CDX90050	Canola	nucleus	28.77	21.79
AT1G01660.2	Thale cress	nucleus	28.54	21.62
AT3G61410.3	Thale cress	cytosol	16.47	21.52
CDY15162	Canola	nucleus	28.31	21.48
Bra033243.1-P	Field mustard	cytosol, plastid	24.83	20.74
Os06t0159900-01	Rice	cytosol, plastid	14.85	18.66
Bra010318.1-P	Field mustard	cytosol	22.27	17.42
CDX95679	Canola	cytosol, extracellular, plastid	5.1	17.05
CDY14575	Canola	cytosol	24.13	13.03
Bra024393.1-P	Field mustard	cytosol	23.9	12.91
CDY54713	Canola	cytosol	23.67	12.78
KRH39466	Soybean	cytosol	23.67	12.75
CDY67215	Canola	cytosol	23.43	12.66
Bra037819.1-P	Field mustard	cytosol	23.43	12.66
CDX81289	Canola	cytosol	23.43	12.64
AT5G65500.2	Thale cress	cytosol	23.43	12.64
KRH74477	Soybean	cytosol	23.43	12.61
KRG99475	Soybean	cytosol	21.81	11.78
VIT_00s0772g00010.t01	Wine grape	cytosol	17.63	11.62
PGSC0003DMT400041610	Potato	cytosol	13.23	10.94
Solyc11g010700.1.1	Tomato	cytosol	14.85	8.02

Protein Annotations

Gene3D:3.30.40.10	MapMan:35.1	EntrezGene:4349328	ProteinID:ABB47968.1	EMBL:AK121815	ProteinID:BAF27168.1
ProteinID:BAT11969.1	ncoils:Coil	ProteinID:EAZ16920.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0004842
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016567	GO:GO:0016740
GO:GO:0019538	InterPro:IPR003613	InterPro:IPR013083	EnsemblPlantsGene:Os10g0552400	EnsemblPlants:Os10t0552400-01	PFAM:PF04564
PFscan:PS51698	PANTHER:PTHR22849	PANTHER:PTHR22849:SF59	UniProt:Q336U1	SMART:SM00504	SUPFAM:SSF57850
UniParc:UPI00005E1F94	InterPro:Ubox_domain	RefSeq:XP_015613154.1	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

plant U-box-containing protein 67, U-box protein 67Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os10t0552400-01)

Coordinates

chr10:+:21679094..21681430

Molecular Weight (calculated)

49066.7 Da

IEP (calculated)

5.280

GRAVY (calculated)

-0.450

Length

431 amino acids

Sequence
(BLAST)

001: MAAPEKVFVA LPAEAKSGRS TLSWALGHFR ATAIVVTHVH VPPQMIPVMG VKFHASKLNP EQVSLFRMAE RDKVDKQLDH YVNQCLRMKM KCEKLVIENE
101: NVVDGLVELI NLHGVTKLVI SAAPDRNYSR KMDKPASRTA TEIMQRADPS CKIWFVCKER LICTSGVEVE IAPGHTPFIP DTGHDALQLT LHQEQDDNNE
201: SELGFYDEIK EACKAADNLM MRALRESYRR QKADEEVVSS LQKAKEYEEL YLEEVKKRKE LEEALLRASE EIAQLKQERD LPKNDQNTTM EEQKEVISDN
301: LILEASGQII KPLQEYLDHD ENCVREPETL LIQRKLAASF SPSSVMQSPF DEDCCIPSYF ICPILQEVMR EPCIASDGFT YETDAIRSWL DGGRRVSPIT
401: GQPIVHQQLI PNLSLRSVIQ DHARRNQYSF S

Best Arabidopsis Sequence Match ( AT3G61390.2 )
(BLAST)

001: MTLKIPIQEM VKMVGSLRSH GIDIPESMEI NKKEKIYVAV TEKDLESKSS LVWAIQNSGG KEFCIVHVHQ PIPGEMFHEQ KLRLYRKEKD KAHKNSEKYL
101: QICRQMQVTA EIIYIETDSV EKGILQLISQ RGVTKLVMGA AADRHYSMRM RDLKSKKAIY IHREAPATCL IWFTCNGYLI CSREARRANN LYLECASSNS
201: LSQSDITRGT ESIVKDDDHL IKLAVTEAEA SKRKARFEAC KREEAEKTAV DALKKAKQWE NVYFEELKQR KETEKALRKR NDELEKMRSE SETQITESYT
301: VIRKLQEKNN LSMETFRGIR EEQEELKIKL REVSKLKGKR EEEEASTSNH REPPQYFICP ITHDIMEDPH VAADGFTYEG EAISRWFERG HETSPMINKR
401: LPHTSLVPNL ALRSAIQEWL QLRELLNRPS ACREI

Arabidopsis Description

PUB36U-box domain-containing protein 36 [Source:UniProtKB/Swiss-Prot;Acc:Q8GZ84]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.