Factsheet for Os08t0400300-01

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
golgi 1
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Os01t0172100-01
Os01t0874300-01
Os02t0730500-01
Os05t0170950-00
Os05t0429900-01
Os11t0180900-00
Os11t0528500-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46550.1	Os02t0730500-01	AT1G54770.1	21798944
AT2G46550.1	Os01t0172100-01	AT3G01550.1	21798944
AT2G46550.1	Os05t0170950-00	AT3G01550.1	21798944
AT2G46550.1	Os01t0874300-01	AT4G09460.1	21798944
AT2G46550.1	Os05t0429900-01	AT4G09460.1	21798944
AT2G46550.1	Os11t0180900-00	AT4G09460.1	21798944
AT2G46550.1	Os11t0528500-01	AT5G51010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES13800	Sorghum	mitochondrion	61.95	62.21
Zm00001d032283_P004	Maize	mitochondrion	60.91	61.17
Os09t0363500-01	Rice	mitochondrion	51.56	53.56
GSMUA_Achr7P24360_001	Banana	nucleus	17.26	50.61
GSMUA_Achr3P32190_001	Banana	mitochondrion, nucleus	34.1	41.31
GSMUA_Achr4P09100_001	Banana	cytosol	35.34	35.49
AT1G01240.3	Thale cress	mitochondrion	24.32	35.35
CDY27317	Canola	nucleus	23.7	35.08
CDY61731	Canola	nucleus	22.66	34.82
Bra032629.1-P	Field mustard	mitochondrion	24.32	34.62
CDY15190	Canola	mitochondrion	22.25	34.41
Solyc01g096100.2.1	Tomato	nucleus	33.47	33.97
Bra039276.1-P	Field mustard	nucleus	23.91	33.92
PGSC0003DMT400000655	Potato	mitochondrion	33.06	33.83
CDY38000	Canola	mitochondrion	23.91	33.82
CDX90019	Canola	mitochondrion	23.49	33.73
CDX99425	Canola	nucleus	4.37	33.33
CDX85174	Canola	nucleus	14.14	33.33
CDY68438	Canola	nucleus	4.37	33.33
Bra033275.1-P	Field mustard	mitochondrion	20.79	32.79
Bra004527.1-P	Field mustard	nucleus, plastid	25.99	32.13
CDX80028	Canola	nucleus, plastid	25.99	32.13
Bra039275.1-P	Field mustard	nucleus	11.85	31.84
AT2G46550.1	Thale cress	nucleus, plastid	26.2	31.74
VIT_16s0098g01690.t01	Wine grape	nucleus, plastid	32.85	31.1
CDY56879	Canola	nucleus	24.53	30.26
KRH64409	Soybean	nucleus	28.27	29.44
KRH53526	Soybean	nucleus	27.86	29.07
PGSC0003DMT400047670	Potato	nucleus	20.37	24.08
Solyc03g083000.2.1	Tomato	nucleus	19.96	23.65

Protein Annotations

EMBL:AK067617	EnsemblPlants:Os08t0400300-01	EnsemblPlantsGene:Os08g0400300	EntrezGene:4345510	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	PANTHER:PTHR33868	PANTHER:PTHR33868:SF1	ProteinID:BAC98668.1	ProteinID:BAC99384.1	ProteinID:BAF23668.1
ProteinID:BAT05337.1	ProteinID:EAZ42655.1	RefSeq:XP_015650816.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI00001D6BFD
UniProt:Q6Z2A0	MapMan:35.2	:	:	:	:

Description

Conserved hypothetical protein. (Os08t0400300-01)

Coordinates

chr8:+:19094906..19098835

Molecular Weight (calculated)

54692.3 Da

IEP (calculated)

6.509

GRAVY (calculated)

-0.779

Length

481 amino acids

Sequence
(BLAST)

001: MAAAEARAAW QRAANRCIVQ EDRKRAPKLA CCPPSSEQQH VKSNGNCRNS EDRPVPNFMP LSWNPMNSSL PPDIRWWLQL QPNLGGQKNL AGEHLYFLGR
101: EISDKEVEDS AQKNIHDEPL FCEMFDTNPE KIEDVFEPSW MVSTASMKYS SETGLQDLKN IGGYSQVPSK CKENASDCLF NDKEFLDFKN FNPPPSKNPQ
201: KDDFDMNAPW KGGERSQPWW QITDENELAL LVAERAMQHI ENCDLPRPTQ IVRVQGTESR SHENMGRYRG SSGPAGTMSY PDTGQCEHIE CSYSTASTDE
301: VDLTSDGVWQ QQERNVARSD AQDFSRGINT EPRGKRTYQN PAEQAQLLEA LCHSQTRARE AEMAGKKAQS EKDDVIKLFF RQASHLFACK QWLKMLQLEN
401: ICLQLKHREH QIATMIPDIP WITLKKRTTP DHEKEDWTRK KGRRHKNAGS FCDALLFAVG LGLAGAGLLL GWTFGWLLAK F

Best Arabidopsis Sequence Match ( AT2G46550.1 )
(BLAST)

001: MAAAEARAVW QRTVNRCFVQ EDAKRAPKLT YCQSSSSSTA SSTKQVEVSG SSPRVSVEPR TQSSCAGFMP LPRNPNFPDL LPHNTRLWSH PHHQFQVNKK
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPY4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.