Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- nucleus 3
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr7P24360_001 | Banana | nucleus | 25.69 | 62.2 |
| GSMUA_Achr4P09100_001 | Banana | cytosol | 50.38 | 41.75 |
| Zm00001d020233_P001 | Maize | mitochondrion | 41.56 | 35.41 |
| TraesCS5D01G198100.1 | Wheat | cytosol, mitochondrion | 40.81 | 34.62 |
| TraesCS5B01G190300.1 | Wheat | cytosol, mitochondrion | 40.55 | 34.55 |
| Os09t0363500-01 | Rice | mitochondrion | 40.05 | 34.34 |
| TraesCS5A01G194900.2 | Wheat | cytosol, mitochondrion | 41.31 | 34.31 |
| Zm00001d005653_P001 | Maize | nucleus | 40.05 | 34.12 |
| Os08t0400300-01 | Rice | nucleus | 41.31 | 34.1 |
| HORVU5Hr1G057510.3 | Barley | cytosol, mitochondrion | 39.55 | 33.91 |
| KXG35486 | Sorghum | cytosol, mitochondrion, nucleus, plasma membrane | 40.05 | 33.9 |
| Zm00001d032283_P004 | Maize | mitochondrion | 38.29 | 31.73 |
| EES13800 | Sorghum | mitochondrion | 36.78 | 30.48 |
| VIT_16s0098g01690.t01 | Wine grape | nucleus, plastid | 37.28 | 29.13 |
| KRH64409 | Soybean | nucleus | 32.75 | 28.14 |
| KRH53526 | Soybean | nucleus | 31.74 | 27.33 |
| GSMUA_AchrUn_... | Banana | cytosol | 10.83 | 18.3 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P32190_001 | EnsemblPlants:GSMUA_Achr3T32190_001 | EnsemblPlantsGene:GSMUA_Achr3G32190_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR33868 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000296304F | UniProt:M0SJN3 | MapMan:35.2 |
Description
Putative expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr3G32190_001]
Coordinates
chr3:+:30148985..30158164
Molecular Weight (calculated)
44842.9 Da
IEP (calculated)
8.090
GRAVY (calculated)
-0.627
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAEARAAW QRTANRYLVQ EDAKRAPKLA CCSSSTPQSD SSNGNTASAQ DSPGPNFMPF SRNLTNAYLS PETKWWLQLQ PNFGYQNELI CEQLSSLEDE
101: ADENMETAVP KSKLEKASSY FETSWAGGNN SEPWWRIADK DELALLVAQK SLHHIENCDL PKPSQTVHVT RDPLSPPENS DTSGIFQSSL GTKLNADICN
201: GNKYSCNTST SVKSDNKNLS SSERGYMLHD SEKPYRQGSI YDGRGYVKNE QPERNQTCED DLSRAQLLEA LCHSQTRARK AEMAAQKAYD EREHIVKLLL
301: RQASHLFAYK QWLLMLQLEN LFLQLRIKEH QISTVIPVLP WIAPKGKLSS EGKITRRRRK KHKCEICKYA VALSLGLGIV TSLLNIYAFK EYIFILN
101: ADENMETAVP KSKLEKASSY FETSWAGGNN SEPWWRIADK DELALLVAQK SLHHIENCDL PKPSQTVHVT RDPLSPPENS DTSGIFQSSL GTKLNADICN
201: GNKYSCNTST SVKSDNKNLS SSERGYMLHD SEKPYRQGSI YDGRGYVKNE QPERNQTCED DLSRAQLLEA LCHSQTRARK AEMAAQKAYD EREHIVKLLL
301: RQASHLFAYK QWLLMLQLEN LFLQLRIKEH QISTVIPVLP WIAPKGKLSS EGKITRRRRK KHKCEICKYA VALSLGLGIV TSLLNIYAFK EYIFILN
001: MAAAEARAVW QRTVNRCFVQ EDAKRAPKLT YCQSSSSSTA SSTKQVEVSG SSPRVSVEPR TQSSCAGFMP LPRNPNFPDL LPHNTRLWSH PHHQFQVNKK
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.