Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- golgi 1
- cytosol 1
- mitochondrion 3
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G057510.3 | Barley | cytosol, mitochondrion | 67.82 | 67.82 |
| TraesCS5D01G198100.1 | Wheat | cytosol, mitochondrion | 68.47 | 67.73 |
| TraesCS5B01G190300.1 | Wheat | cytosol, mitochondrion | 68.03 | 67.6 |
| TraesCS5A01G194900.2 | Wheat | cytosol, mitochondrion | 68.9 | 66.74 |
| Zm00001d020233_P001 | Maize | mitochondrion | 65.23 | 64.81 |
| KXG35486 | Sorghum | cytosol, mitochondrion, nucleus, plasma membrane | 65.44 | 64.61 |
| Zm00001d005653_P001 | Maize | nucleus | 61.77 | 61.37 |
| GSMUA_Achr7P24360_001 | Banana | nucleus | 18.36 | 51.83 |
| Os08t0400300-01 | Rice | nucleus | 53.56 | 51.56 |
| GSMUA_Achr3P32190_001 | Banana | mitochondrion, nucleus | 34.34 | 40.05 |
| CDX99425 | Canola | nucleus | 5.18 | 38.1 |
| CDY68438 | Canola | nucleus | 5.18 | 38.1 |
| GSMUA_Achr4P09100_001 | Banana | cytosol | 36.5 | 35.28 |
| AT1G01240.3 | Thale cress | mitochondrion | 24.84 | 34.74 |
| CDY61731 | Canola | nucleus | 22.25 | 32.91 |
| CDY27317 | Canola | nucleus | 22.89 | 32.62 |
| Bra039276.1-P | Field mustard | nucleus | 23.54 | 32.15 |
| CDX85174 | Canola | nucleus | 14.04 | 31.86 |
| CDY15190 | Canola | mitochondrion | 21.38 | 31.83 |
| AT2G46550.1 | Thale cress | nucleus, plastid | 27.21 | 31.74 |
| PGSC0003DMT400000655 | Potato | mitochondrion | 32.18 | 31.7 |
| CDX80028 | Canola | nucleus, plastid | 26.35 | 31.36 |
| Bra004527.1-P | Field mustard | nucleus, plastid | 26.35 | 31.36 |
| Solyc01g096100.2.1 | Tomato | nucleus | 31.97 | 31.22 |
| Bra032629.1-P | Field mustard | mitochondrion | 22.68 | 31.07 |
| CDY56879 | Canola | nucleus | 26.13 | 31.03 |
| CDY38000 | Canola | mitochondrion | 22.46 | 30.59 |
| CDX90019 | Canola | mitochondrion | 22.03 | 30.45 |
| VIT_16s0098g01690.t01 | Wine grape | nucleus, plastid | 31.75 | 28.94 |
| Bra033275.1-P | Field mustard | mitochondrion | 19.01 | 28.85 |
| KRH53526 | Soybean | nucleus | 28.51 | 28.63 |
| KRH64409 | Soybean | nucleus | 27.86 | 27.92 |
| Bra039275.1-P | Field mustard | nucleus | 10.37 | 26.82 |
| Solyc03g083000.2.1 | Tomato | nucleus | 21.6 | 24.63 |
| PGSC0003DMT400047670 | Potato | nucleus | 21.17 | 24.08 |
Protein Annotations
| EMBL:AK065312 | EnsemblPlants:Os09t0363500-01 | EnsemblPlantsGene:Os09g0363500 | EntrezGene:4346860 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR33868 | PANTHER:PTHR33868:SF1 | ProteinID:BAD23412.1 | ProteinID:BAD33713.1 | ProteinID:BAF24906.1 |
| ProteinID:BAT07714.1 | ProteinID:EAZ44460.1 | RefSeq:XP_015612219.1 | SEG:seg | TMHMM:TMhelix | UniParc:UPI00003B0635 |
| UniProt:Q6K4E1 | MapMan:35.2 | : | : | : | : |
Description
Conserved hypothetical protein. (Os09t0363500-01)
Coordinates
chr9:+:11904784..11908107
Molecular Weight (calculated)
52498.0 Da
IEP (calculated)
8.164
GRAVY (calculated)
-0.813
Length
463 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAETRAAW QRAANRCRVQ EDAKRAPKLG CCPPSGQQHE TNNGNQTNPQ DCHIPNFMPL NWNAMNSNLP KDTQWWLQLQ PNFGCQNVLA SEDLNYMCGE
101: VDVKKVESFA PVSKLEDINP KKTADPFEPP WIVSTAFMKQ TYETGFEELK SLPAYSEMTL KCRGSATYLH EDKEHMDFKT FDPLYPKKPQ TACYEMDAPW
201: QENRKSRPWW QVAEADGLAS VVAESEMHNV GKNELPRPTQ RAHGSKLNNH ENKDDYGPYT GKESPPVQYD TMLCSYSISS TNETNSSDGG GWQHQRNDAR
301: GGTQDSCSSD DRTPGSKPTY RSAAERTQLL DALRHSQTRA REAEMAAKKA YDEKDHVIKL LFRQASHLFA CKQWLKMLQL ENICLQLRLK EHQIAAMFPE
401: LPWIMLKEKV TPGQERKDGT RKKGRKQNKD SHLRKAVVFA VGVGIVGAGL LLGWTLGWLL PRL
101: VDVKKVESFA PVSKLEDINP KKTADPFEPP WIVSTAFMKQ TYETGFEELK SLPAYSEMTL KCRGSATYLH EDKEHMDFKT FDPLYPKKPQ TACYEMDAPW
201: QENRKSRPWW QVAEADGLAS VVAESEMHNV GKNELPRPTQ RAHGSKLNNH ENKDDYGPYT GKESPPVQYD TMLCSYSISS TNETNSSDGG GWQHQRNDAR
301: GGTQDSCSSD DRTPGSKPTY RSAAERTQLL DALRHSQTRA REAEMAAKKA YDEKDHVIKL LFRQASHLFA CKQWLKMLQL ENICLQLRLK EHQIAAMFPE
401: LPWIMLKEKV TPGQERKDGT RKKGRKQNKD SHLRKAVVFA VGVGIVGAGL LLGWTLGWLL PRL
001: MAAAEARAVW QRTVNRCFVQ EDAKRAPKLT YCQSSSSSTA SSTKQVEVSG SSPRVSVEPR TQSSCAGFMP LPRNPNFPDL LPHNTRLWSH PHHQFQVNKK
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF
Arabidopsis Description
Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPY4]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.