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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • nucleus 4
  • mitochondrion 4
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:plastid
EpiLoc:nucleus
MultiLoc:mitochondrion
Plant-mPloc:nucleus
Predotar:mitochondrion
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT1G01240.3 Thale cress mitochondrion 60.66 55.89
CDX90019 Canola mitochondrion 61.31 55.82
CDY15190 Canola mitochondrion 56.39 55.31
Bra032629.1-P Field mustard mitochondrion 51.48 46.45
Bra039275.1-P Field mustard nucleus 18.36 31.28
Bra039276.1-P Field mustard nucleus 31.15 28.02
KRH68927 Soybean nucleus 33.44 23.94
KRG97204 Soybean nucleus 33.44 23.94
Bra004527.1-P Field mustard nucleus, plastid 30.16 23.65
VIT_15s0046g00260.t01 Wine grape mitochondrion, nucleus 33.77 21.55
Os08t0400300-01 Rice nucleus 32.79 20.79
Zm00001d005653_P001 Maize nucleus 31.48 20.6
KRH47890 Soybean cytosol, mitochondrion 28.85 19.82
KRH06447 Soybean cytosol, mitochondrion 28.85 19.78
Zm00001d020233_P001 Maize mitochondrion 30.16 19.74
HORVU5Hr1G057510.3 Barley cytosol, mitochondrion 29.84 19.65
TraesCS5B01G190300.1 Wheat cytosol, mitochondrion 29.84 19.53
TraesCS5D01G198100.1 Wheat cytosol, mitochondrion 29.84 19.44
KXG35486 Sorghum cytosol, mitochondrion, nucleus, plasma membrane 29.84 19.4
Zm00001d032283_P004 Maize mitochondrion 30.16 19.21
TraesCS5A01G194900.2 Wheat cytosol, mitochondrion 29.84 19.04
Os09t0363500-01 Rice mitochondrion 28.85 19.01
EES13800 Sorghum mitochondrion 28.52 18.16
PGSC0003DMT400047670 Potato nucleus 23.93 17.94
Solyc03g083000.2.1 Tomato nucleus 22.3 16.75
GSMUA_AchrUn_... Banana cytosol 8.85 11.49
Protein Annotations
EnsemblPlants:Bra033275.1EnsemblPlants:Bra033275.1-PEnsemblPlantsGene:Bra033275ncoils:CoilPANTHER:PTHR33868SEG:seg
UniParc:UPI000254514DUniProt:M4EWU0MapMan:35.2:::
Description
AT1G01240 (E=2e-085) | unknown protein
Coordinates
chrA10:+:4549128..4550045
Molecular Weight (calculated)
35134.2 Da
IEP (calculated)
8.323
GRAVY (calculated)
-0.765
Length
305 amino acids
Sequence
(BLAST)
001: MGAAEARALW QRTAAGRCFA VREDFLMAPR LTSCHHQRSS SGNTEKSSYY SKSFGDFFCD TKWWLKGSSG FGEEIANTFF EDDTKCKKLH DFVDLIGKRE
101: QEDVEYSFIS KKDTTTPWWR SITDIDELAL LVATRSLDYN IQNCDLPPPQ KLHKRIHCTS GEKGFISPQW KQGAWSDRFE SSLSHSSSTA SKNKSPKSPP
201: MSDDLSNAQL LEALRHSQTR AREAEKVARE ACAEKERVIT IFLRHATHLL AYKQWVKLLE MEVICRQMKK GGARRTRAYQ RSESEESEEE NGRDWKIYDG
301: FCFRV
Best Arabidopsis Sequence Match ( AT1G01240.2 )
(BLAST)
001: MGAAEARALW QRTASRCFVV HEDAKMAPRL ACCQHQQSSS GNTEKNSFSS GSFGDSSDFS CDTKWWLKGS TGFDEEVTNS FLEDTKCKKL HEFVDLIGIR
101: EEEDYSFISK KADATTPWWR STTDKDELAL MVATKSVDHN IQNCDLPPPQ KLHKSIHSSS GEKGFKTAVK SPWKQGVWKD RFERSLSYNG STESKNTSPM
201: SSPRSDDLSK GQLLEALRHS QTRAREAERA AREACAEKDR VITILLKQAS QMLAYKQWLK LLEMEALYLQ MKKEEEQEEQ VKGMNLKKRK QRGEKKKKGE
301: TGRYMMAFAL GFSLIGAGLL LGWTVGWLLP F
Arabidopsis Description
At1g01240/F6F3_11 [Source:UniProtKB/TrEMBL;Acc:Q9LNJ7]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.