CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 4
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EES01839
EES03779
EES05586
EES09846
EES16743
EES17796
KXG22070
KXG31751
OQU78830
OQU83016

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G46550.1	EES05586	AT1G54770.1	21798944
AT2G46550.1	EES17796	AT3G01550.1	21798944
AT2G46550.1	KXG31751	AT3G01550.1	21798944
AT2G46550.1	EES03779	AT3G60360.1	21798944
AT2G46550.1	EES01839	AT4G09460.1	21798944
AT2G46550.1	EES16743	AT4G09460.1	21798944
AT2G46550.1	KXG22070	AT4G09460.1	21798944
AT2G46550.1	OQU78830	AT4G09460.1	21798944
AT2G46550.1	OQU83016	AT4G09460.1	21798944
AT2G46550.1	EES09846	AT5G51010.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032283_P004	Maize	mitochondrion	90.81	90.81
Os08t0400300-01	Rice	nucleus	62.21	61.95
KXG35486	Sorghum	cytosol, mitochondrion, nucleus, plasma membrane	51.15	52.24
GSMUA_Achr7P24360_001	Banana	nucleus	16.7	48.78
GSMUA_Achr3P32190_001	Banana	mitochondrion, nucleus	30.48	36.78
CDY68438	Canola	nucleus	4.59	34.92
CDX99425	Canola	nucleus	4.59	34.92
GSMUA_Achr4P09100_001	Banana	cytosol	34.03	34.03
CDX85174	Canola	nucleus	14.4	33.82
CDY61731	Canola	nucleus	21.92	33.55
AT1G01240.3	Thale cress	mitochondrion	23.17	33.53
CDY15190	Canola	mitochondrion	21.29	32.8
Solyc01g096100.2.1	Tomato	nucleus	32.36	32.7
CDY27317	Canola	nucleus	22.13	32.62
PGSC0003DMT400000655	Potato	mitochondrion	31.94	32.55
CDX90019	Canola	mitochondrion	22.55	32.24
Bra039276.1-P	Field mustard	nucleus	22.55	31.86
Bra032629.1-P	Field mustard	mitochondrion	22.34	31.66
CDY38000	Canola	mitochondrion	22.13	31.18
AT2G46550.1	Thale cress	nucleus, plastid	24.84	29.97
Bra039275.1-P	Field mustard	nucleus	11.06	29.61
Bra004527.1-P	Field mustard	nucleus, plastid	24.01	29.56
CDX80028	Canola	nucleus, plastid	24.01	29.56
CDY56879	Canola	nucleus	23.59	28.97
VIT_16s0098g01690.t01	Wine grape	nucleus, plastid	30.27	28.54
Bra033275.1-P	Field mustard	mitochondrion	18.16	28.52
KRH53526	Soybean	nucleus	24.63	25.6
KRH64409	Soybean	nucleus	24.43	25.32
PGSC0003DMT400047670	Potato	nucleus	19.83	23.34
Solyc03g083000.2.1	Tomato	nucleus	19.62	23.15

Protein Annotations

EnsemblPlants:EES13800	EnsemblPlantsGene:SORBI_3007G122200	EntrezGene:8070054	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
PANTHER:PTHR33868	PANTHER:PTHR33868:SF1	ProteinID:EES13800	ProteinID:EES13800.1	RefSeq:XP_002444305.1	SEG:seg
TMHMM:TMhelix	unigene:Sbi.18778	UniParc:UPI0001A877DD	UniProt:C5YKR4	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr7:+:52627611..52631213

Molecular Weight (calculated)

54071.8 Da

IEP (calculated)

7.090

GRAVY (calculated)

-0.654

Length

479 amino acids

Sequence
(BLAST)

001: MAAAEARAAW QRAANRCLVQ EDRKRAPKLA CCPPSAEQHG TNNGNCRNSA DRPICSLVPL RWNPMHSNLP PDFRWWVQSQ PNFGIQKDIV SERLRSLGTD
101: IHEKQVEDSA PQPKHEETLL CQAVDANTEK IGDVLDPPWM VSSAFTKYSL ETGLEEMKTV DSYSQVSKCI ETLSNCLYKD NESPDFECID PAPLKNPDKA
201: NFDMDAPWKG EKIRPWWQIA DEEQLASLVA ERATQHIENC DLPRPTQTVR INRTEPHTRK HIGDYGGSSS PAGRVTHPVP GHCDHIECSY STGSTDELVL
301: LYGNGVWEQH GRNDTYSAAQ YFSSSSTTGL ESKQTLWNAS ERDKILEALR HSQTRAREAD MAAKKAHNEK DDVIKLLFRQ ASHLFACNQW LKIMQLENIV
401: LQLKHKEHQI AAIIPELPWL TLKEKPTHGQ EQRDWTRRKG RRQKKGGGFF DTILFAVGLG LAGAGFLLGW ALGWLLPKL

Best Arabidopsis Sequence Match ( AT2G46550.1 )
(BLAST)

001: MAAAEARAVW QRTVNRCFVQ EDAKRAPKLT YCQSSSSSTA SSTKQVEVSG SSPRVSVEPR TQSSCAGFMP LPRNPNFPDL LPHNTRLWSH PHHQFQVNKK
101: QPLEDEVNNQ GVSEKKSELG AGEKQGKSFN SESFQEFIEL METRESYGST GYDESSEKKL SELSFDPSSP WNLLSSEKAA PWWRTTDKDE LASLVAQRSL
201: DYVENCDLPT PQKMKRSYYG SPRGFDSDGL RDYSVSGQTI KGTSKGSSCK NRPEASSESD LSKSELLEAL RRSQTRAREA ENMAKEAYAE KEHLVKILLK
301: QAAELFGYKQ WLQLLQLEAL YLQIKNKEID NKNNDDPGVS IPCWSNGKAR KEGRKRRSKR GKPNGAKYAV GLALGMSLVG AGLLLGWTVG WMQMLSF

Arabidopsis Description

Expressed protein [Source:UniProtKB/TrEMBL;Acc:Q9ZPY4]
SUBAcon: [plastid,nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.