CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d017901_P001	Maize	cytosol, plasma membrane, plastid	24.19	88.18
Os05t0170950-00	Rice	endoplasmic reticulum	19.7	86.81
Zm00001d037659_P001	Maize	plastid	88.78	83.37
TraesCS1A01G115200.1	Wheat	plastid	81.05	79.85
TraesCS1D01G116600.1	Wheat	plastid	79.8	79.21
TraesCS1B01G135100.1	Wheat	plastid	80.8	79.02
HORVU1Hr1G025390.3	Barley	plastid	80.05	78.87
KXG31751	Sorghum	plastid	61.85	59.05
Solyc02g086650.2.1	Tomato	plastid	52.87	53.4
KRG93252	Soybean	plastid	54.11	53.19
PGSC0003DMT400001273	Potato	plastid	51.87	52.39
Zm00001d044715_P001	Maize	cytosol, plasma membrane, plastid	35.41	51.82
EES07792	Sorghum	plastid	51.12	51.64
Zm00001d034088_P001	Maize	extracellular	35.91	51.25
AT3G01550.1	Thale cress	mitochondrion, plastid	48.13	50.39
Bra001003.1-P	Field mustard	plastid	47.38	49.87
CDX74305	Canola	plastid	47.38	49.74
CDX91942	Canola	plastid	46.63	48.83
VIT_14s0066g01000.t01	Wine grape	mitochondrion, plastid	52.12	48.49
Zm00001d051000_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	26.68	47.98
OQU89208	Sorghum	plastid	54.36	45.7
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	24.44	39.36
EES13461	Sorghum	plastid	32.17	33.33
EER99986	Sorghum	plastid	32.17	31.77
OQU77692	Sorghum	plastid	30.42	29.33

Protein Annotations

MapMan:24.2.1.1.1	EntrezGene:8072706	UniProt:C5Z145	EnsemblPlants:EES17796	ProteinID:EES17796	ProteinID:EES17796.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	ProteinID:OQU77523.1	PFAM:PF03151	PANTHER:PTHR43973
PANTHER:PTHR43973:SF6	EnsemblPlantsGene:SORBI_3009G062500	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix
InterPro:Tpt_PEP_transl	UniParc:UPI0001A888C5	RefSeq:XP_002439366.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr9:+:6634490..6638136

Molecular Weight (calculated)

42988.0 Da

IEP (calculated)

10.739

GRAVY (calculated)

0.508

Length

401 amino acids

Sequence
(BLAST)

001: MQSMAASCSS SSSSSSSRAW AAARRSPSPP SLAFSSSSSF PSSSHGCRWP VAPRGIRGVL RPLPSPLLAP CVARAGAAAA ASPPAAGKPE GAAGISRTLQ
101: LGAMILVWYL LNIYFNIYNK LVLKAIPFPY TITTFHFASG SFFITLMWLL NLHPKPRLSL KQYAKLLPLA LIHMLGNVFT NMSLGKVAVS FTHTVKAMEP
201: FFSVLLSVLF LGQTPSLLVL GSLVPVVGGV VLASMTEVSF NWIGFWSAMA SNLTNQSRNV YSKKILADKE DSLDDINLFS IITIMAFLLS APLMLSVEGI
301: KFSPSYLQSA GVSVKELCVR AALAGTCFYF YQQVSYSLLA RVSPVTHSVA NSLKRVVVIV SSVLFFRTPI SPINALGTGV ALAGVFLYSQ FKKLKPKTKA
401: A

Best Arabidopsis Sequence Match ( AT5G33320.1 )
(BLAST)

001: MQSSAVFSLS PSLPLLKPRR LSLRHHPITT AASSSDLNVS PNVVSIPSLS RRSWRLASSD SPLRAWSGVP SPISHSLDTN RFRTAATAVP ESAEEGDNSG
101: KLTKVLELGL LFAMWYLFNI YFNIYNKQVL KALHAPMTVT LVQFAVGSVL ITIMWVLNLY KRPKISGAQL AAILPLAVVH TLGNLFTNMS LGKVSVSFTH
201: TIKAMEPFFS VLLSAMFLGE KPTPWVLGAI VPIVGGVALA SISEVSFNWA GFSSAMASNL TNQSRNVLSK KVMVKKDDSL DNITLFSIIT LMSLVLMAPV
301: TFFTEGIKFT PSYIQSAGVN VKQIYTKSLI AALCFHAYQQ VSYMILARVS PVTHSVGNCV KRVVVIVSSV IFFKTPVSPV NAFGTGIALA GVFLYSRVKG
401: IKPKPKTA

Arabidopsis Description

PPT1Phosphoenolpyruvate/phosphate translocator 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.