CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d046001_P001	Maize	plastid	34.24	95.86
Zm00001d039258_P001	Maize	plastid	93.6	92.91
Zm00001d009028_P001	Maize	plastid	90.15	90.37
HORVU3Hr1G032490.1	Barley	golgi, plasma membrane	70.69	84.66
TraesCS3D01G168600.1	Wheat	mitochondrion	82.02	82.84
TraesCS3B01G192400.1	Wheat	mitochondrion, plastid	81.53	82.34
Os01t0239200-01	Rice	plastid	83.25	81.06
TraesCS3A01G161300.1	Wheat	golgi	81.28	79.9
GSMUA_Achr3P03200_001	Banana	plastid	76.85	76.28
VIT_10s0003g00300.t01	Wine grape	plastid	75.37	75.37
KRH20388	Soybean	plastid	74.88	74.88
KRH50117	Soybean	mitochondrion, plastid	74.38	74.38
GSMUA_Achr10P...	Banana	plastid	74.38	73.66
CDY48790	Canola	mitochondrion	72.66	73.2
Bra025037.1-P	Field mustard	mitochondrion, plastid	72.91	72.73
CDY33455	Canola	plastid	72.66	72.48
OQU77692	Sorghum	plastid	73.15	71.39
CDX77632	Canola	plastid	72.41	71.36
PGSC0003DMT400058772	Potato	plastid	72.41	70.84
AT5G46110.4	Thale cress	mitochondrion	72.17	70.6
Solyc10g008980.2.1	Tomato	plastid	72.17	70.6
CDY53419	Canola	mitochondrion	72.41	57.2
CDY04362	Canola	plastid	31.77	53.97
Bra022019.1-P	Field mustard	mitochondrion	72.41	45.87
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	24.88	40.56
EES13461	Sorghum	plastid	32.51	34.11
EES17796	Sorghum	plastid	31.77	32.17
EES07792	Sorghum	plastid	31.03	31.74
KXG31751	Sorghum	plastid	29.56	28.57
OQU89208	Sorghum	plastid	31.03	26.42

Protein Annotations

MapMan:24.2.1.1.1	MapMan:3.1.1.1	EntrezGene:8078074	UniProt:C5XJI1	EnsemblPlants:EER99986	ProteinID:EER99986
ProteinID:EER99986.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	PFAM:PF03151	PANTHER:PTHR44585
PANTHER:PTHR44585:SF1	EnsemblPlantsGene:SORBI_3003G002300	SUPFAM:SSF103481	unigene:Sbi.17751	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817
TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI0001A84949	RefSeq:XP_002454867.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:272805..276517

Molecular Weight (calculated)

43587.9 Da

IEP (calculated)

10.228

GRAVY (calculated)

0.578

Length

406 amino acids

Sequence
(BLAST)

001: MSAAGTLSGG AAGLSGLLRL RRRAAPAPAI AAPSLHPAGT IKCTAVPDAA PIVWGRQLRP ALLLPAALLP SSQPAKKHNL RPAAAAAESA GEAKGFLEKY
101: PALVTGFFFF MWYFLNVIFN ILNKKIYNYF PYPYFVSLIH LVVGVAYCLV GWSVGLPKRA PINANLLKLL FPVALCHGIG HVTSNVSFAA VAVSFAHTIK
201: ALEPFFSAAA TQFILGQQVP LSLWMSLAPV VIGVSMASLT ELSFNWTGFI NAMISNISFT YRSIYSKKAM TDMDSTNVYA YISIIALIVC IPPAIIFEGP
301: QLMSHGFSDA IAKVGLTKFV SDLVLVGLFY HLYNQIATNT LERVAPLTHA VGNVLKRVFV IGFSIVVFGN KISTQTGIGT SIAIAGVALY SYIKAKIEEE
401: KRKKSA

Best Arabidopsis Sequence Match ( AT5G46110.4 )
(BLAST)

001: MESRVLLRAT ANVVGIPKLR RPIGAIHRQF STASSSSFSV KPIGGIGEGA NLISGRQLRP ILLLDSSAIN GGEKREILKP VKAAAAEGGD TAGDAKVGFL
101: AKYPWLVTGF FFFMWYFLNV IFNILNKKIY NYFPYPYFVS VIHLFVGVVY CLISWSVGLP KRAPIDSNLL KVLIPVAVCH ALGHVTSNVS FAAVAVSFTH
201: TIKALEPFFN AAASQFIMGQ SIPITLWLSL APVVLGVAMA SLTELSFNWL GFISAMISNI SFTYRSIFSK KAMTDMDSTN VYAYISIIAL FVCIPPAIIV
301: EGPKLLNHGF ADAIAKVGMT KFISDLFWVG MFYHLYNQLA TNTLERVAPL THAVGNVLKR VFVIGFSIVI FGNKISTQTG IGTGIAIAGV AMYSIIKAKI
401: EEEKRVTRKE SIESS

Arabidopsis Description

APE2Glucose-6-phosphate/phosphate translocator-like protein [Source:UniProtKB/TrEMBL;Acc:A0A219I0W9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.