CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 4
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48790	Canola	mitochondrion	76.07	97.02
CDY33455	Canola	plastid	72.57	91.65
CDX77632	Canola	plastid	72.96	91.02
AT5G46110.4	Thale cress	mitochondrion	70.62	87.47
Zm00001d046001_P001	Maize	plastid	23.54	83.45
VIT_10s0003g00300.t01	Wine grape	plastid	62.84	79.56
KRH20388	Soybean	plastid	62.65	79.31
HORVU3Hr1G032490.1	Barley	golgi, plasma membrane	52.14	79.06
KRH50117	Soybean	mitochondrion, plastid	62.26	78.82
GSMUA_Achr3P03200_001	Banana	plastid	61.48	77.26
Solyc10g008980.2.1	Tomato	plastid	59.92	74.22
PGSC0003DMT400058772	Potato	plastid	59.73	73.98
GSMUA_Achr10P...	Banana	plastid	58.95	73.9
Zm00001d010043_P001	Maize	cytosol, plasma membrane, plastid	24.51	73.68
EER99986	Sorghum	plastid	57.2	72.41
Zm00001d009028_P001	Maize	plastid	57.0	72.35
Zm00001d039258_P001	Maize	plastid	57.39	72.13
TraesCS3D01G168600.1	Wheat	mitochondrion	56.03	71.64
TraesCS3B01G192400.1	Wheat	mitochondrion, plastid	55.64	71.14
Os01t0239200-01	Rice	plastid	57.2	70.5
TraesCS3A01G161300.1	Wheat	golgi	56.03	69.73
TraesCS1D01G078000.1	Wheat	plastid	54.67	69.21
TraesCS1A01G075700.2	Wheat	plastid	53.89	68.4
HORVU1Hr1G016360.1	Barley	plastid	53.89	68.23
TraesCS1B01G094300.1	Wheat	plastid	53.7	67.98
Os05t0241200-01	Rice	plastid	53.11	67.57
OQU77692	Sorghum	plastid	53.5	66.11
CDY04362	Canola	plastid	28.4	61.09
Zm00001d010044_P001	Maize	mitochondrion, plasma membrane	24.51	58.33
CDY34641	Canola	plastid	25.49	36.09
CDY16905	Canola	plastid	26.85	34.41
CDY38448	Canola	plastid	26.85	34.33
CDY55220	Canola	plastid	25.68	34.11
CDY52572	Canola	plastid	25.88	34.1
CDY43022	Canola	plastid	25.68	33.85
CDY25324	Canola	plastid	25.68	33.42
CDY17274	Canola	plastid	26.85	33.33
CDY19859	Canola	plastid	26.85	33.33
CDX74305	Canola	plastid	24.32	32.72
CDX91942	Canola	plastid	24.12	32.38
CDY12390	Canola	plastid	24.32	31.09
CDY47555	Canola	plastid	24.51	30.96
CDY28750	Canola	plastid	26.26	30.0
CDY06630	Canola	plastid	26.26	29.87

Protein Annotations

MapMan:24.2.1.1.1	MapMan:3.1.1.1	GO:A0A078IVG4	UniProt:A0A078IVG4	EnsemblPlants:CDY53419	ProteinID:CDY53419
ProteinID:CDY53419.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00010651001	PFAM:PF03151
PANTHER:PTHR44585	PANTHER:PTHR44585:SF1	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl
UniParc:UPI0004EEFB1E	SEG:seg	:	:	:	:

Description

BnaC02g47130DBnaC02g47130D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IVG4]

Coordinates

chrLK033198:+:61235..65038

Molecular Weight (calculated)

57000.9 Da

IEP (calculated)

9.441

GRAVY (calculated)

0.129

Length

514 amino acids

Sequence
(BLAST)

001: MESRLLLRAT VTGVPQLRRP IGAIHRQVST ASSFTAFAKL IGSVGEGGNL ISGRQLRPIL LLDSSPEKRE ILKPVRAAAG DSAGEAKVGF LGKYPWLVTG
101: FFFFMWYVYF LNVIFNILNK KIYNYFPYPY FVSAVHLFVG VVYCLLSWSV GLPKRAPIDS NLLKVLIPVA VCHAIGHITS NVSFAAVAVS FTHTIKALEP
201: FFNASASQFL LGQSIPITLW LSLAPVVLGV AMASLTELSF NWLGFISAMI SNISFTYRSI FSKKAMTDMD STNVYAYISI IALIVCIPPA IIVEGPQLLK
301: HGFSDAIAKV GMTKFISDLF WVGMFYHLYN QLATNTLERV APLTHAVGNV LKRVFVIGFS IVIFGNKIST QTGIGTGIAI AGVALYSIIK AKIEEDKKEK
401: MINVRYGFSF ASERKDGVES GGQRLHKQFF RQTITELTDT NRNIPVPENH PSTTDGEEEQ EPVFVRDTGH GYGLYGRRTS HTNNEEDNSN ENNDNDNDQF
501: YYRSDAFGNR NGRF

Best Arabidopsis Sequence Match ( AT5G46110.1 )
(BLAST)

001: MESRVLLRAT ANVVGIPKLR RPIGAIHRQF STASSSSFSV KPIGGIGEGA NLISGRQLRP ILLLDSSAIN GGEKREILKP VKAAAAEGGD TAGDAKVGFL
101: AKYPWLVTGF FFFMWYFLNV IFNILNKKIY NYFPYPYFVS VIHLFVGVVY CLISWSVGLP KRAPIDSNLL KVLIPVAVCH ALGHVTSNVS FAAVAVSFTH
201: TIKALEPFFN AAASQFIMGQ SIPITLWLSL APVVLGVAMA SLTELSFNWL GFISAMISNI SFTYRSIFSK KAMTDMDSTN VYAYISIIAL FVCIPPAIIV
301: EGPKLLNHGF ADAIAKVGMT KFISDLFWVG MFYHLYNQLA TNTLERVAPL THAVGNVLKR VFVIGFSIVI FGNKISTQTG IGTGIAIAGV AMYSIIKAKI
401: EEEKRQGKKA

Arabidopsis Description

APE2Glucose-6-phosphate/phosphate translocator-like protein [Source:UniProtKB/TrEMBL;Acc:A0A219I0W9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.