CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra022745.1-P	Field mustard	plastid	96.24	96.67
CDY28750	Canola	plastid	96.24	96.67
CDY52572	Canola	plastid	80.31	93.08
CDY43022	Canola	plastid	79.2	91.79
AT5G54800.1	Thale cress	plastid	77.65	90.46
CDY17274	Canola	plastid	80.53	87.92
CDY19859	Canola	plastid	80.53	87.92
Os07t0523965-01	Rice	plasma membrane	51.77	85.09
Os07t0523600-01	Rice	plastid	51.77	85.09
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	45.8	83.13
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	10.62	76.19
CDY34641	Canola	plastid	60.18	74.93
CDY55220	Canola	plastid	62.83	73.39
GSMUA_Achr7P03380_001	Banana	plastid	63.05	72.52
CDY25324	Canola	plastid	63.27	72.41
TraesCS2A01G220400.1	Wheat	plastid	60.62	71.35
KRH20881	Soybean	plastid	61.5	71.1
KRH11399	Soybean	plastid	61.5	71.1
TraesCS2B01G245900.1	Wheat	plastid	60.18	70.83
GSMUA_Achr9P11730_001	Banana	plastid	61.95	69.83
Zm00001d021653_P001	Maize	plastid	58.19	67.26
GSMUA_Achr8P07300_001	Banana	mitochondrion, plastid	63.27	65.75
GSMUA_Achr4P33530_001	Banana	plastid	60.18	65.7
Zm00001d006511_P002	Maize	plastid	59.07	63.42
TraesCS2D01G226000.2	Wheat	plastid	60.4	61.63
HORVU2Hr1G045900.2	Barley	plastid	60.4	60.0
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	58.19	59.37
Os07t0523400-01	Rice	plasma membrane	31.19	49.65
KRH02096	Soybean	plastid	64.82	48.51
CDY16905	Canola	plastid	39.38	44.39
CDY38448	Canola	plastid	39.16	44.03
CDY33455	Canola	plastid	30.53	33.91
CDX77632	Canola	plastid	30.53	33.5
CDY48790	Canola	mitochondrion	29.42	33.0
CDX91942	Canola	plastid	27.21	32.11
CDY12390	Canola	plastid	28.54	32.09
CDX74305	Canola	plastid	26.99	31.94
CDY47555	Canola	plastid	28.54	31.7
CDY04362	Canola	plastid	16.37	30.96
CDY53419	Canola	mitochondrion	29.87	26.26

Protein Annotations

MapMan:24.2.1.1.1	GO:A0A078EX44	EnsemblPlants:CDY06630	ProteinID:CDY06630	ProteinID:CDY06630.1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00122784001	PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF1
SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI0004EE8803
SEG:seg	:	:	:	:	:

Description

BnaC02g13540D

Coordinates

chrLK031971:-:899812..902323

Molecular Weight (calculated)

49106.2 Da

IEP (calculated)

9.537

GRAVY (calculated)

0.376

Length

452 amino acids

Sequence
(BLAST)

001: MVLAAKQTLS AKIGFSNPLL RRNPPSPSLQ RPPPSLSFPS TALPKRTVLS LSRPLHLSSL RAESPVRCSA YEADKSEPQP IDAAAETKSE AAKKLKIGIY
101: FATWWALNVV FNIYNKKVLN AYPYPWLTST LSLAAGSLMM LISWAVGIVE TPKTDFDFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFLLGET FPASVYLSLI PIIGGCALSA LTELNFNMTG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMLS LLILTPFAFA VEGPQMWADG
301: WQKALSEIGP QFVGWVAAQS VFYHLYNQVS YMSLDQISPL TFSVGNTMKR ISVIVSSIII FRTPVQPVNA LGAAVAILGT FLYSQFIGLG CFWSNIVEDS
401: KILSLRSNVS LTACHAGKAL IRQDMECCSP MLSSLISVKT GSEGLDVDMC PQ

Best Arabidopsis Sequence Match ( AT5G54800.1 )
(BLAST)

001: MVLSVKQTLS PKIGLFRRNP SSSLGRSPVS LSFPSTELPK RTVLAVSKPL HLSSSLRAKS PVVRCEAYEA DRSEPHPIGD DAAAAETKSE AAKKLKIGIY
101: FATWWALNVV FNIYNKKVLN AYPYPWLTST LSLAAGSLMM LISWAVGIVE TPKTDFDFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFILGET FPTSVYLSLI PIIGGCALSA LTELNFNMIG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMLS LLILTPFAIA VEGPQMWVDG
301: WQTALATVGP QFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSVGNTMKR ISVIVSSIII FRTPVQPVNA LGAAIAILGT FLYSQAKL

Arabidopsis Description

GPT1GPT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UL59]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.