CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 9

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038952.1-P	Field mustard	plastid	99.25	98.52
CDY47555	Canola	plastid	99.25	98.03
AT5G33320.1	Thale cress	plastid	91.54	90.2
KRH63546	Soybean	endoplasmic reticulum, mitochondrion, plastid	68.66	69.7
KRH54382	Soybean	endoplasmic reticulum, mitochondrion, plastid	69.15	68.47
VIT_17s0000g08560.t01	Wine grape	plastid	68.91	67.56
PGSC0003DMT400046741	Potato	plastid	67.66	66.34
GSMUA_Achr3P28500_001	Banana	plasma membrane	60.45	66.03
Solyc03g112870.2.1	Tomato	plastid	66.17	64.88
TraesCS5A01G178100.1	Wheat	plastid	62.94	63.09
TraesCS5B01G175700.2	Wheat	golgi	62.44	62.59
Zm00001d032383_P001	Maize	plastid	61.44	62.53
TraesCS5D01G182500.1	Wheat	plastid	62.19	62.34
Os09t0297400-01	Rice	plastid	62.94	62.01
Os08t0344600-01	Rice	plastid	62.69	61.92
EES07792	Sorghum	plastid	60.7	61.46
Zm00001d020004_P002	Maize	plastid	62.94	59.95
GSMUA_Achr1P25520_001	Banana	plastid	58.71	59.3
GSMUA_Achr8P31900_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	61.44	57.18
Zm00001d005542_P001	Maize	plastid	61.19	57.08
HORVU5Hr1G054180.1	Barley	mitochondrion, plastid	61.19	55.28
CDX74305	Canola	plastid	50.5	53.14
OQU89208	Sorghum	plastid	62.44	52.62
CDX91942	Canola	plastid	49.25	51.7
CDY34641	Canola	plastid	31.59	34.99
CDY55220	Canola	plastid	33.58	34.88
CDY25324	Canola	plastid	33.58	34.18
CDY16905	Canola	plastid	33.33	33.42
CDY52572	Canola	plastid	32.34	33.33
CDY43022	Canola	plastid	32.09	33.08
CDY38448	Canola	plastid	32.59	32.59
CDY48790	Canola	mitochondrion	32.09	32.01
CDY33455	Canola	plastid	32.34	31.94
CDX77632	Canola	plastid	31.84	31.07
CDY04362	Canola	plastid	18.41	30.96
CDY19859	Canola	plastid	31.34	30.43
CDY17274	Canola	plastid	31.34	30.43
CDY28750	Canola	plastid	32.34	28.89
CDY06630	Canola	plastid	32.09	28.54
CDY53419	Canola	mitochondrion	31.09	24.32

Protein Annotations

MapMan:24.2.1.1.1	GO:A0A078FDC5	UniProt:A0A078FDC5	EnsemblPlants:CDY12390	ProteinID:CDY12390	ProteinID:CDY12390.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00061614001	PFAM:PF03151	PANTHER:PTHR43973
PANTHER:PTHR43973:SF8	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl
UniParc:UPI0000030AE1	SEG:seg	:	:	:	:

Description

BnaC08g08150DBnaC08g08150D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FDC5]

Coordinates

chrLK032021:-:622025..624684

Molecular Weight (calculated)

43525.8 Da

IEP (calculated)

10.816

GRAVY (calculated)

0.476

Length

402 amino acids

Sequence
(BLAST)

001: MQSSAVFSAS PSLPLLKPGR LSLRHPVTAS SNLSVSPPNV VSVPPLPRRS WRLASSDSPL RAWSGLPSVS SPSLDTNRFK TAATAVPEEG EGSGKMTKVL
101: ELGLLFAMWY LFNIYFNIYN KQVLKALHAP MTVTLVQFAV GSVLITFMWA LNLYKRPKIS AAQLAAILPL AVVHTLGNLF TNMSLGKVSV SFTHTIKAME
201: PFFSVVLSAM FLGEVPTPWV IGSIIPIVGG VALASVTEVS FNWAGFLSAM ASNLTNQSRN VLSKKVMVKK DDSLDNITLF SIITLMSLFL MAPVTFFSEG
301: IKFTPSYIQS AGVNVQQIYT KSLIAALCFH AYQQVSYMIL ARVSPVTHSV GNCVKRVVVI VSSVIFFKTP VSPVNAFGTG IALAGVFLYS RVKRIKPKPK
401: TA

Best Arabidopsis Sequence Match ( AT5G33320.1 )
(BLAST)

001: MQSSAVFSLS PSLPLLKPRR LSLRHHPITT AASSSDLNVS PNVVSIPSLS RRSWRLASSD SPLRAWSGVP SPISHSLDTN RFRTAATAVP ESAEEGDNSG
101: KLTKVLELGL LFAMWYLFNI YFNIYNKQVL KALHAPMTVT LVQFAVGSVL ITIMWVLNLY KRPKISGAQL AAILPLAVVH TLGNLFTNMS LGKVSVSFTH
201: TIKAMEPFFS VLLSAMFLGE KPTPWVLGAI VPIVGGVALA SISEVSFNWA GFSSAMASNL TNQSRNVLSK KVMVKKDDSL DNITLFSIIT LMSLVLMAPV
301: TFFTEGIKFT PSYIQSAGVN VKQIYTKSLI AALCFHAYQQ VSYMILARVS PVTHSVGNCV KRVVVIVSSV IFFKTPVSPV NAFGTGIALA GVFLYSRVKG
401: IKPKPKTA

Arabidopsis Description

PPT1Phosphoenolpyruvate/phosphate translocator 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.