Factsheet for Zm00001d032383_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 3
plasma membrane 1

Predictors

GFP

MS/MS

Papers

plastid: 20089766
plastid: 22065420
plastid: 23198870

msms PMID: 20089766 doi

G Friso, W Majeran, M Huang, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

msms PMID: 23198870 doi

M Huang, G Friso, K Nishimura, X Qu, PD Olinares, W Majeran, Q Sun, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, United States.

msms PMID: 22065420 doi

W Majeran, G Friso, Y Asakura, X Qu, M Huang, L Ponnala, KP Watkins, A Barkan, KJ van Wijk

Department of Plant Biology, Cornell University, Ithaca, New York 14853, USA.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07792	Sorghum	plastid	86.08	85.64
Os08t0344600-01	Rice	plastid	82.53	80.1
Zm00001d020004_P002	Maize	plastid	77.72	72.75
GSMUA_Achr3P28500_001	Banana	plasma membrane	66.08	70.92
Zm00001d005542_P001	Maize	plastid	76.46	70.07
KRH63546	Soybean	endoplasmic reticulum, mitochondrion, plastid	64.81	64.65
KRH54382	Soybean	endoplasmic reticulum, mitochondrion, plastid	66.08	64.29
KRH03277	Soybean	plastid	62.03	64.14
Solyc03g112870.2.1	Tomato	plastid	66.33	63.9
PGSC0003DMT400046741	Potato	plastid	65.82	63.41
GSMUA_Achr1P25520_001	Banana	plastid	63.29	62.81
VIT_17s0000g08560.t01	Wine grape	plastid	64.81	62.44
GSMUA_Achr8P31900_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	67.59	61.81
CDY12390	Canola	plastid	62.53	61.44
Bra038952.1-P	Field mustard	plastid	62.53	60.99
CDY47555	Canola	plastid	62.53	60.69
AT5G33320.1	Thale cress	plastid	61.27	59.31
Zm00001d017901_P001	Maize	cytosol, plasma membrane, plastid	16.2	58.18
Zm00001d039674_P001	Maize	plastid	52.15	49.64
Zm00001d037659_P001	Maize	plastid	51.65	47.78
Zm00001d046001_P001	Maize	plastid	14.94	40.69
Zm00001d051000_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	21.77	38.56
Zm00001d034088_P001	Maize	extracellular	26.84	37.72
Zm00001d021653_P001	Maize	plastid	33.92	34.27
Zm00001d049441_P001	Maize	plastid	32.91	33.59
Zm00001d000021_P002	Maize	plastid	33.42	33.5
Zm00001d006511_P002	Maize	plastid	34.18	32.07
Zm00001d044715_P001	Maize	cytosol, plasma membrane, plastid	22.03	31.75
Zm00001d010044_P001	Maize	mitochondrion, plasma membrane	16.96	31.02
Zm00001d009028_P001	Maize	plastid	31.39	30.62
Zm00001d039258_P001	Maize	plastid	31.39	30.32
Zm00001d010043_P001	Maize	cytosol, plasma membrane, plastid	12.91	29.82

Protein Annotations

EntrezGene:100283648	MapMan:24.2.1.1.1	EMBL:BT062686	UniProt:C0P317	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009670	GO:GO:0015121	GO:GO:0015714
GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0035436	GO:GO:0055085	GO:GO:0089722
ProteinID:ONM04982.1	PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF2	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom
TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI0001948F29	EnsemblPlantsGene:Zm00001d032383	EnsemblPlants:Zm00001d032383_P001
EnsemblPlants:Zm00001d032383_T001	SEG:seg	:	:	:	:

Description

Phosphoenolpyruvate/phosphate translocator 1 chloroplastic

Coordinates

chr1:+:224766461..224770369

Molecular Weight (calculated)

42576.0 Da

IEP (calculated)

10.685

GRAVY (calculated)

0.568

Length

395 amino acids

Sequence
(BLAST)

001: MQSAAAFRPC PTRLLVSSPC RPLLSARPLR ASAAGAVATR SSAVGPRGLG LGLLPASPDR DGKCRQRQVS CSAAGDAVAA PKAEEGGGLM KTLWLGSLFG
101: LWYLFNIYFN IYNKQVLKVF PYPINITEVQ FAVGTVAALF MWITGIIKRP KISGAQLVAI LPLAIVHTMG NLFTNMSLGK VAVSFTHTIK AMEPFFSVIL
201: SAIFLGELPT IWVVSSLLPI VGGVALASLT EASFNWAGFW SAMASNVTFQ SRNVLSKKLM VKKEESLDNL NLFSIITVMS FFLLAPVTFF TEGVKITPTF
301: LQSAGLNVNQ VLTRCLFAGL CFHAYQQVSY MILAMVSPVT HSVGNCVKRV VVIVTSVLFF RTPVSPINSL GTAIALAGVF LYSQLKRLKP KPKTA

Best Arabidopsis Sequence Match ( AT5G33320.1 )
(BLAST)

001: MQSSAVFSLS PSLPLLKPRR LSLRHHPITT AASSSDLNVS PNVVSIPSLS RRSWRLASSD SPLRAWSGVP SPISHSLDTN RFRTAATAVP ESAEEGDNSG
101: KLTKVLELGL LFAMWYLFNI YFNIYNKQVL KALHAPMTVT LVQFAVGSVL ITIMWVLNLY KRPKISGAQL AAILPLAVVH TLGNLFTNMS LGKVSVSFTH
201: TIKAMEPFFS VLLSAMFLGE KPTPWVLGAI VPIVGGVALA SISEVSFNWA GFSSAMASNL TNQSRNVLSK KVMVKKDDSL DNITLFSIIT LMSLVLMAPV
301: TFFTEGIKFT PSYIQSAGVN VKQIYTKSLI AALCFHAYQQ VSYMILARVS PVTHSVGNCV KRVVVIVSSV IFFKTPVSPV NAFGTGIALA GVFLYSRVKG
401: IKPKPKTA

Arabidopsis Description

PPT1Phosphoenolpyruvate/phosphate translocator 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.