CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032383_P001	Maize	plastid	85.64	86.08
Os08t0344600-01	Rice	plastid	78.59	76.66
GSMUA_Achr3P28500_001	Banana	plasma membrane	64.48	69.57
KRH03277	Soybean	plastid	61.71	64.14
OQU89208	Sorghum	plastid	76.83	63.94
KRH63546	Soybean	endoplasmic reticulum, mitochondrion, plastid	63.73	63.89
KRH54382	Soybean	endoplasmic reticulum, mitochondrion, plastid	64.74	63.3
Solyc03g112870.2.1	Tomato	plastid	64.99	62.93
PGSC0003DMT400046741	Potato	plastid	64.74	62.68
GSMUA_Achr1P25520_001	Banana	plastid	62.47	62.31
GSMUA_Achr8P31900_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	67.25	61.81
VIT_17s0000g08560.t01	Wine grape	plastid	63.22	61.22
CDY12390	Canola	plastid	61.46	60.7
Bra038952.1-P	Field mustard	plastid	61.46	60.25
CDY47555	Canola	plastid	61.46	59.95
AT5G33320.1	Thale cress	plastid	59.95	58.33
EES17796	Sorghum	plastid	51.64	51.12
KXG31751	Sorghum	plastid	51.39	48.57
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	27.46	43.78
EES13461	Sorghum	plastid	34.26	35.14
EER99986	Sorghum	plastid	31.74	31.03
OQU77692	Sorghum	plastid	31.23	29.81

Protein Annotations

MapMan:24.2.1.1.1	EntrezGene:8055344	UniProt:C5XWM4	EnsemblPlants:EES07792	ProteinID:EES07792	ProteinID:EES07792.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0009670
GO:GO:0015121	GO:GO:0015714	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0035436
GO:GO:0055085	GO:GO:0089722	PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF8	EnsemblPlantsGene:SORBI_3004G353100
SUPFAM:SSF103481	unigene:Sbi.3715	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl
UniParc:UPI0001A86156	RefSeq:XP_002454816.1	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr4:-:68129916..68134915

Molecular Weight (calculated)

42615.7 Da

IEP (calculated)

10.830

GRAVY (calculated)

0.539

Length

397 amino acids

Sequence
(BLAST)

001: MQSAAAFRPC PAGAGAGAGQ LVSRNPSRGP LLPVPARPLR VVVSAATTRA LGLGRLRLSA SPDDRSGQRQ VSCGAAGDAV AAPSAEEGGG FMKTLWLGSL
101: FGLWYLFNIY FNIYNKQVLK VFPYPINITE AQFAVGSVVS LFFWTTGIIK RPKISGAQLA AILPLAIVHT MGNLFTNMSL GKVAVSFTHT IKAMEPFFSV
201: LLSAIFLGEF PTVWVVASLL PIVGGVALAS LTEASFNWIG FWSAMASNVT FQSRNVLSKK LMVKKEESLD NLNLFSIITV MSFFVLAPVT FFTEGVKITP
301: TFLQSAGLNV NQVLTRSLLA GLCFHAYQQV SYMILAMVSP VTHSVGNCVK RVVVIVTSVL FFRTPVSPIN SLGTAIALAG VFLYSQLKRL KPKPKTP

Best Arabidopsis Sequence Match ( AT5G33320.1 )
(BLAST)

001: MQSSAVFSLS PSLPLLKPRR LSLRHHPITT AASSSDLNVS PNVVSIPSLS RRSWRLASSD SPLRAWSGVP SPISHSLDTN RFRTAATAVP ESAEEGDNSG
101: KLTKVLELGL LFAMWYLFNI YFNIYNKQVL KALHAPMTVT LVQFAVGSVL ITIMWVLNLY KRPKISGAQL AAILPLAVVH TLGNLFTNMS LGKVSVSFTH
201: TIKAMEPFFS VLLSAMFLGE KPTPWVLGAI VPIVGGVALA SISEVSFNWA GFSSAMASNL TNQSRNVLSK KVMVKKDDSL DNITLFSIIT LMSLVLMAPV
301: TFFTEGIKFT PSYIQSAGVN VKQIYTKSLI AALCFHAYQQ VSYMILARVS PVTHSVGNCV KRVVVIVSSV IFFKTPVSPV NAFGTGIALA GVFLYSRVKG
401: IKPKPKTA

Arabidopsis Description

PPT1Phosphoenolpyruvate/phosphate translocator 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.