CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra038952.1-P	Field mustard	plastid	99.51	100.0
CDY12390	Canola	plastid	98.03	99.25
AT5G33320.1	Thale cress	plastid	91.65	91.42
KRH63546	Soybean	endoplasmic reticulum, mitochondrion, plastid	68.06	69.95
KRH54382	Soybean	endoplasmic reticulum, mitochondrion, plastid	68.8	68.97
VIT_17s0000g08560.t01	Wine grape	plastid	68.8	68.29
PGSC0003DMT400046741	Potato	plastid	67.32	66.83
GSMUA_Achr3P28500_001	Banana	plasma membrane	59.95	66.3
Solyc03g112870.2.1	Tomato	plastid	65.85	65.37
TraesCS5A01G178100.1	Wheat	plastid	62.41	63.34
TraesCS5B01G175700.2	Wheat	golgi	61.92	62.84
TraesCS5D01G182500.1	Wheat	plastid	61.67	62.59
Zm00001d032383_P001	Maize	plastid	60.69	62.53
Os09t0297400-01	Rice	plastid	62.41	62.25
Os08t0344600-01	Rice	plastid	61.92	61.92
EES07792	Sorghum	plastid	59.95	61.46
Zm00001d020004_P002	Maize	plastid	62.41	60.19
GSMUA_Achr1P25520_001	Banana	plastid	57.99	59.3
GSMUA_Achr8P31900_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	60.93	57.41
Zm00001d005542_P001	Maize	plastid	60.69	57.31
HORVU5Hr1G054180.1	Barley	mitochondrion, plastid	60.69	55.51
CDX74305	Canola	plastid	50.37	53.66
OQU89208	Sorghum	plastid	61.92	52.83
CDX91942	Canola	plastid	49.14	52.22
CDY34641	Canola	plastid	31.2	34.99
CDY55220	Canola	plastid	33.17	34.88
CDY25324	Canola	plastid	33.17	34.18
CDY16905	Canola	plastid	32.92	33.42
CDY52572	Canola	plastid	31.94	33.33
CDY43022	Canola	plastid	31.7	33.08
CDY38448	Canola	plastid	32.19	32.59
CDY48790	Canola	mitochondrion	31.94	32.26
CDY33455	Canola	plastid	32.19	32.19
CDX77632	Canola	plastid	31.7	31.31
CDY04362	Canola	plastid	18.18	30.96
CDY19859	Canola	plastid	30.96	30.43
CDY17274	Canola	plastid	30.96	30.43
CDY28750	Canola	plastid	31.94	28.89
CDY06630	Canola	plastid	31.7	28.54
CDY53419	Canola	mitochondrion	30.96	24.51

Protein Annotations

MapMan:24.2.1.1.1	GO:A0ST33	UniProt:A0ST33	ProteinID:ACD39395.1	unigene:Bna.2678	EnsemblPlants:CDY47555
ProteinID:CDY47555	ProteinID:CDY47555.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00087638001
PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF8	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817
TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI0000E86CDD	SEG:seg	:	:

Description

BnaA08g07320DBnaA08g07320D protein [Source:UniProtKB/TrEMBL;Acc:A0ST33]

Coordinates

chrLK032721:-:90190..92484

Molecular Weight (calculated)

44182.6 Da

IEP (calculated)

10.815

GRAVY (calculated)

0.442

Length

407 amino acids

Sequence
(BLAST)

001: MQSSAVFSLS PSLPLLKPRR LSLRHPVTAS SSSNLNVSPP NVVSVPPLPR RSWRLASSDS PLRAWSGLPS VSSPSLDTNR FKTAATAVPE NAEEGEGSGK
101: MTKVLELGLL FAMWYLFNIY FNIYNKQVLK ALHAPMTVTL VQFAVGSVLI TFMWALNLYK RPKISAAQLA AILPLAVVHT LGNLFTNMSL GKVSVSFTHT
201: IKAMEPFFSV VLSAMFLGEV PTPWVIGSII PIVGGVALAS VTEVSFNWAG FLSAMASNLT NQSRNVLSKK VMVKKDDSLD NITLFSIITL MSLFLMAPVT
301: FFSEGIKFTP SYIQSAGVNV QQIYTKSLIA ALCFHAYQQV SYMILARVSP VTHSVGNCVK RVVVIVSSVI FFKTPVSPVN AFGTGIALAG VFLYSRVKRI
401: KPKPKTA

Best Arabidopsis Sequence Match ( AT5G33320.1 )
(BLAST)

001: MQSSAVFSLS PSLPLLKPRR LSLRHHPITT AASSSDLNVS PNVVSIPSLS RRSWRLASSD SPLRAWSGVP SPISHSLDTN RFRTAATAVP ESAEEGDNSG
101: KLTKVLELGL LFAMWYLFNI YFNIYNKQVL KALHAPMTVT LVQFAVGSVL ITIMWVLNLY KRPKISGAQL AAILPLAVVH TLGNLFTNMS LGKVSVSFTH
201: TIKAMEPFFS VLLSAMFLGE KPTPWVLGAI VPIVGGVALA SISEVSFNWA GFSSAMASNL TNQSRNVLSK KVMVKKDDSL DNITLFSIIT LMSLVLMAPV
301: TFFTEGIKFT PSYIQSAGVN VKQIYTKSLI AALCFHAYQQ VSYMILARVS PVTHSVGNCV KRVVVIVSSV IFFKTPVSPV NAFGTGIALA GVFLYSRVKG
401: IKPKPKTA

Arabidopsis Description

PPT1Phosphoenolpyruvate/phosphate translocator 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.