CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY55220	Canola	plastid	94.68	96.64
Os07t0523600-01	Rice	plastid	61.77	88.73
Os07t0523965-01	Rice	plasma membrane	61.77	88.73
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	55.7	88.35
AT1G61800.2	Thale cress	plastid	88.86	85.61
CDY34641	Canola	plastid	77.72	84.57
KRH20881	Soybean	plastid	77.97	78.77
KRH11399	Soybean	plastid	77.72	78.52
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	12.41	77.78
CDY52572	Canola	plastid	72.66	73.59
GSMUA_Achr7P03380_001	Banana	plastid	73.16	73.54
TraesCS2A01G220400.1	Wheat	plastid	71.14	73.18
TraesCS2B01G245900.1	Wheat	plastid	70.89	72.92
CDY43022	Canola	plastid	71.65	72.56
GSMUA_Achr9P11730_001	Banana	plastid	73.42	72.32
PGSC0003DMT400013500	Potato	plastid	71.9	70.82
Solyc05g045670.2.1	Tomato	plastid	71.9	70.82
Zm00001d021653_P001	Maize	plastid	68.86	69.57
PGSC0003DMT400065527	Potato	plastid	71.14	69.38
CDY19859	Canola	plastid	72.15	68.84
GSMUA_Achr4P33530_001	Banana	plastid	72.15	68.84
CDY17274	Canola	plastid	71.9	68.6
GSMUA_Achr8P07300_001	Banana	mitochondrion, plastid	73.16	66.44
Zm00001d006511_P002	Maize	plastid	69.11	64.85
TraesCS2D01G226000.2	Wheat	plastid	71.65	63.88
CDY06630	Canola	plastid	72.41	63.27
CDY28750	Canola	plastid	71.9	63.11
HORVU2Hr1G045900.2	Barley	plastid	71.65	62.2
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	67.34	60.05
Os07t0523400-01	Rice	plasma membrane	37.47	52.11
KRH02096	Soybean	plastid	75.19	49.17
CDY16905	Canola	plastid	43.54	42.89
CDY38448	Canola	plastid	43.29	42.54
CDY12390	Canola	plastid	34.18	33.58
CDY33455	Canola	plastid	34.43	33.42
CDY47555	Canola	plastid	34.18	33.17
CDX77632	Canola	plastid	34.43	33.01
CDY48790	Canola	mitochondrion	32.91	32.26
CDX74305	Canola	plastid	31.14	32.2
CDX91942	Canola	plastid	30.63	31.59
CDY04362	Canola	plastid	18.23	30.13
CDY53419	Canola	mitochondrion	33.42	25.68

Protein Annotations

MapMan:24.2.1.1.1	GO:A0A078GJ76	UniProt:A0A078GJ76	EnsemblPlants:CDY25324	ProteinID:CDY25324	ProteinID:CDY25324.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00029422001	PFAM:PF03151	PANTHER:PTHR43973
PANTHER:PTHR43973:SF1	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl
UniParc:UPI0004EDACFC	SEG:seg	:	:	:	:

Description

BnaC01g29930DBnaC01g29930D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJ76]

Coordinates

chrLK032173:+:329151..331031

Molecular Weight (calculated)

43636.5 Da

IEP (calculated)

10.107

GRAVY (calculated)

0.391

Length

395 amino acids

Sequence
(BLAST)

001: MISSVKPTPS SFSATSTGAR RSIPTKLQFS PLRITRSCHN QSFINSNVSH QKPLHISSAQ NLSSFKREVR VEAYEADRYR PLDINIELPD EQSAQKLKIG
101: IYFATWWALN VVFNIYNKKV LNAFPYPWLT STLSLACGSL MMLVSWASRI AEAPKTDLDF WKTLFPVAVA HTIGHVAATV SMSKVAVSFT HIIKSGEPAF
201: SVLVSRFFLG ETFPLPVYLS LLPIIGGCAL AAVTELNFNM IGFMGAMISN LAFVFRNIFS KKGMKGKSVS GMNYYACLSM MSLLILTPFA IAVEGPKMWA
301: AGWENAVSRI GPNFVWWVVA QSVFYHLYNQ VSYMSLDQIS PLTFSIGNTM KRISVIVASI IIFHTPVQPV NALGAAIAIL GTFLYSQVNI QSLVV

Best Arabidopsis Sequence Match ( AT1G61800.2 )
(BLAST)

001: MLSSIKPSSS SFSTAISGSV RRSIPTKLKF SPLLIIKNCH NQSFNANVVS HQKPLHISSA SNFKREVKVE AYEADRSRPL DINIELPDEQ SAQKLKIGIY
101: FATWWALNVV FNIYNKKVLN AFPYPWLTST LSLACGSLMM LVSWATRIAD APKTDLEFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFFMGET FPLPVYLSLL PIIGGCALAA ITELNFNITG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMMS LVILTPFSIA VEGPQMWAAG
301: WQNAVSQVGP NFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSIGNTMKR ISVIVASIII FHTPIQPVNA LGAAIAIFGT FLYSQVNKQT YSCLPTSSTW
401: FFSEQFLVLI

Arabidopsis Description

GPT2glucose-6-phosphate/phosphate translocator 2 [Source:TAIR;Acc:AT1G61800]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.