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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane, vacuole

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, vacuole
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os07t0523600-01 Rice plastid 95.18 86.18
Os07t0523965-01 Rice plasma membrane 95.18 86.18
PGSC0003DMT400014284 Potato mitochondrion 49.0 84.72
GSMUA_Achr10P... Banana endoplasmic reticulum, extracellular 17.27 68.25
GSMUA_Achr2P14020_001 Banana vacuole 65.46 68.2
Zm00001d021653_P001 Maize plastid 97.59 62.15
Bra031772.1-P Field mustard plastid 84.34 61.22
TraesCS2A01G220400.1 Wheat plastid 93.57 60.68
TraesCS2B01G245900.1 Wheat plastid 93.57 60.68
CDY34641 Canola plastid 86.35 59.23
CDY55220 Canola plastid 89.16 57.36
Zm00001d006511_P002 Maize plastid 96.39 57.01
VIT_19s0177g00300.t01 Wine grape plastid 88.35 56.56
KRH20881 Soybean plastid 88.35 56.27
Bra031393.1-P Field mustard plastid 88.35 56.12
EES13461 Sorghum plastid 87.15 56.07
KRH11399 Soybean plastid 87.95 56.01
CDY25324 Canola plastid 88.35 55.7
VIT_10s0116g00760.t01 Wine grape plastid 87.15 55.22
KRG98852 Soybean plastid 87.15 55.08
Solyc03g031740.1.1 Tomato plastid 83.94 54.86
GSMUA_Achr7P03380_001 Banana plastid 85.94 54.45
KRH46103 Soybean mitochondrion 86.35 54.43
GSMUA_Achr9P11730_001 Banana plastid 86.75 53.87
AT5G54800.1 Thale cress plastid 83.13 53.35
PGSC0003DMT400013500 Potato plastid 85.54 53.12
Solyc05g045670.2.1 Tomato plastid 85.54 53.12
Solyc07g064270.2.1 Tomato plastid 83.53 52.66
CDY43022 Canola plastid 82.33 52.56
CDY52572 Canola plastid 82.33 52.56
PGSC0003DMT400002701 Potato plastid 83.53 52.53
Bra029005.1-P Field mustard plastid 81.93 52.31
TraesCS2D01G226000.2 Wheat plastid 92.77 52.14
PGSC0003DMT400065527 Potato plastid 84.74 52.1
AT1G61800.2 Thale cress plastid 85.54 51.95
KRH73710 Soybean plastid 81.53 51.39
HORVU2Hr1G045900.2 Barley plastid 93.57 51.21
KRH14442 Soybean plastid 81.12 51.14
GSMUA_Achr8P07300_001 Banana mitochondrion, plastid 86.75 49.66
Bra002955.1-P Field mustard plastid 82.33 49.52
GSMUA_Achr4P33530_001 Banana plastid 82.33 49.52
CDY19859 Canola plastid 82.33 49.52
CDY17274 Canola plastid 82.33 49.52
GSMUA_Achr10P... Banana cytosol, plasma membrane, plastid 86.35 48.53
Solyc07g052450.1.1 Tomato plastid 38.96 48.26
AT4G03950.1 Thale cress plasma membrane 51.41 46.21
CDY28750 Canola plastid 83.13 46.0
Bra022745.1-P Field mustard plastid 83.13 46.0
CDY06630 Canola plastid 83.13 45.8
KRH75852 Soybean cytosol, endoplasmic reticulum, plastid 59.04 41.53
KRH02096 Soybean plastid 83.53 34.44
Os07t0523400-01 Rice plasma membrane 38.15 33.45
EES07792 Sorghum plastid 43.78 27.46
EER99986 Sorghum plastid 40.56 24.88
EES17796 Sorghum plastid 39.36 24.44
OQU77692 Sorghum plastid 40.56 24.28
OQU89208 Sorghum plastid 42.97 22.43
KXG31751 Sorghum plastid 37.35 22.14
Protein Annotations
MapMan:24.2.1.1.1UniProt:A0A1W0W6J5GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0022857GO:GO:0055085EnsemblPlants:OQU90029
ProteinID:OQU90029ProteinID:OQU90029.1PFAM:PF03151PANTHER:PTHR43973PANTHER:PTHR43973:SF4EnsemblPlantsGene:SORBI_3002G322000
SUPFAM:SSF103481InterPro:Sugar_P_trans_domTIGRFAMs:TIGR00817TMHMM:TMhelixInterPro:Tpt_PEP_translUniParc:UPI0009DC86FB
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:69347211..69349695
Molecular Weight (calculated)
27016.3 Da
IEP (calculated)
9.038
GRAVY (calculated)
0.684
Length
249 amino acids
Sequence
(BLAST)
001: MLASWATRIA EAPETDLDFW KSLTPVAIAH TIGHVAATVS MAKVAVSFTH IIKSGEPAFS VLVSRFFLGE HFPAPVYFSL LPIIGGCALS AVTELNFNMV
101: GFMGAMISNL AFVFRTIFSK KGMKGKSVSG MNYYACLSIM SLVILLPFAI AMEGPKVWAA GWQNAVAEIG PNFVWWVAAQ SVFYHLYNQV SYMSLDEISP
201: LTFSIGNTMK RISVIVASII IFQTPVQPIN ALGAAIAILG TFIYSQAKQ
Best Arabidopsis Sequence Match ( AT1G61800.1 )
(BLAST)
001: MLSSIKPSSS SFSTAISGSV RRSIPTKLKF SPLLIIKNCH NQSFNANVVS HQKPLHISSA SNFKREVKVE AYEADRSRPL DINIELPDEQ SAQKLKIGIY
101: FATWWALNVV FNIYNKKVLN AFPYPWLTST LSLACGSLMM LVSWATRIAD APKTDLEFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFFMGET FPLPVYLSLL PIIGGCALAA ITELNFNITG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMMS LVILTPFSIA VEGPQMWAAG
301: WQNAVSQVGP NFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSIGNTMKR ISVIVASIII FHTPIQPVNA LGAAIAIFGT FLYSQAKQ
Arabidopsis Description
GPT2glucose-6-phosphate/phosphate translocator 2 [Source:TAIR;Acc:AT1G61800]
SUBAcon: [plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.