CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0241200-01	Rice	plastid	75.0	77.23
TraesCS1D01G078000.1	Wheat	plastid	73.8	75.62
HORVU1Hr1G016360.1	Barley	plastid	73.8	75.62
TraesCS1A01G075700.2	Wheat	plastid	73.32	75.31
TraesCS1B01G094300.1	Wheat	plastid	73.08	74.88
EER99986	Sorghum	plastid	71.39	73.15
Zm00001d010044_P001	Maize	mitochondrion, plasma membrane	37.5	72.22
VIT_10s0003g00300.t01	Wine grape	plastid	69.47	71.18
GSMUA_Achr3P03200_001	Banana	plastid	69.95	71.15
KRH20388	Soybean	plastid	68.51	70.2
KRH50117	Soybean	mitochondrion, plastid	68.51	70.2
Bra025037.1-P	Field mustard	mitochondrion, plastid	67.55	69.04
CDY33455	Canola	plastid	67.31	68.8
GSMUA_Achr10P...	Banana	plastid	67.55	68.54
CDY48790	Canola	mitochondrion	66.35	68.49
CDX77632	Canola	plastid	67.07	67.72
AT5G46110.4	Thale cress	mitochondrion	66.35	66.51
PGSC0003DMT400058772	Potato	plastid	65.87	66.02
Solyc10g008980.2.1	Tomato	plastid	65.38	65.54
CDY53419	Canola	mitochondrion	66.11	53.5
CDY04362	Canola	plastid	30.05	52.3
Bra022019.1-P	Field mustard	mitochondrion	66.59	43.21
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	24.28	40.56
EES13461	Sorghum	plastid	31.97	34.37
EES07792	Sorghum	plastid	29.81	31.23
EES17796	Sorghum	plastid	29.33	30.42
KXG31751	Sorghum	plastid	28.12	27.86
OQU89208	Sorghum	plastid	30.77	26.83

Protein Annotations

MapMan:24.2.1.1.1	MapMan:3.1.1.1	EntrezGene:8058293	UniProt:C5YV95	ProteinID:EES17928.1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	EnsemblPlants:OQU77692	ProteinID:OQU77692	ProteinID:OQU77692.1	PFAM:PF03151
PANTHER:PTHR44585	PANTHER:PTHR44585:SF1	EnsemblPlantsGene:SORBI_3009G088200	SUPFAM:SSF103481	unigene:Sbi.2581	InterPro:Sugar_P_trans_dom
TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI0001A88AB7	RefSeq:XP_002439498.1	SEG:seg

Description

hypothetical protein

Coordinates

chr9:+:15253718..15286153

Molecular Weight (calculated)

45147.4 Da

IEP (calculated)

10.282

GRAVY (calculated)

0.492

Length

416 amino acids

Sequence
(BLAST)

001: MHIAQTNPRF HRAAIPPNSQ QAQMAAVGTL PGAAAVAGAS VRQRQCRGAA PSFVAAYVRE GTRLVYGRQL RPAPVLACPA RRRFLGAAAA AASSGSAGDA
101: EPQGFAERYP TLVTGFFFFL WYFLNVIFNI LNKKIFDYFP YPYFVSVSHL FIGVLYCLIG WSFGIPKRAP INSTLLKQLL PVAVCHAIGH VTSTVSFAAV
201: AVSFAHTIKA LEPFFNAAAS QFILGQPVPL TLWLSLVPVV VGVSVASLTE LSFNWTGFIN AMISNISFTY RSIYSKKAMT DMDSTNLYAY ISIIALFVCI
301: PPALIIEGPQ LMQHGFKDAI GKVGLTKLIS NFFVVGLFYH LYNQVATNTL ERVAPLSHAI GNVLKRVFVI GFSIIVFGNK ITTQTGIGTS IAISGVALYS
401: FIKAKIEEEK KQIKSA

Best Arabidopsis Sequence Match ( AT5G46110.1 )
(BLAST)

001: MESRVLLRAT ANVVGIPKLR RPIGAIHRQF STASSSSFSV KPIGGIGEGA NLISGRQLRP ILLLDSSAIN GGEKREILKP VKAAAAEGGD TAGDAKVGFL
101: AKYPWLVTGF FFFMWYFLNV IFNILNKKIY NYFPYPYFVS VIHLFVGVVY CLISWSVGLP KRAPIDSNLL KVLIPVAVCH ALGHVTSNVS FAAVAVSFTH
201: TIKALEPFFN AAASQFIMGQ SIPITLWLSL APVVLGVAMA SLTELSFNWL GFISAMISNI SFTYRSIFSK KAMTDMDSTN VYAYISIIAL FVCIPPAIIV
301: EGPKLLNHGF ADAIAKVGMT KFISDLFWVG MFYHLYNQLA TNTLERVAPL THAVGNVLKR VFVIGFSIVI FGNKISTQTG IGTGIAIAGV AMYSIIKAKI
401: EEEKRQGKKA

Arabidopsis Description

APE2Glucose-6-phosphate/phosphate translocator-like protein [Source:UniProtKB/TrEMBL;Acc:A0A219I0W9]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.