CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020004_P002	Maize	plastid	77.57	87.68
Os09t0297400-01	Rice	plastid	72.54	84.8
TraesCS5B01G175700.2	Wheat	golgi	68.55	81.55
TraesCS5D01G182500.1	Wheat	plastid	68.34	81.3
TraesCS5A01G178100.1	Wheat	plastid	68.34	81.3
Zm00001d005542_P001	Maize	plastid	72.96	80.74
EES07792	Sorghum	plastid	63.94	76.83
HORVU5Hr1G054180.1	Barley	mitochondrion, plastid	66.04	70.79
GSMUA_Achr3P28500_001	Banana	plasma membrane	54.09	70.11
KRH03277	Soybean	plastid	53.25	66.49
KRH63546	Soybean	endoplasmic reticulum, mitochondrion, plastid	54.3	65.4
GSMUA_Achr8P31900_001	Banana	cytosol, mitochondrion, plasma membrane, plastid	58.7	64.81
KRH54382	Soybean	endoplasmic reticulum, mitochondrion, plastid	55.14	64.78
Solyc03g112870.2.1	Tomato	plastid	55.56	64.63
GSMUA_Achr1P25520_001	Banana	plastid	53.88	64.57
PGSC0003DMT400046741	Potato	plastid	55.35	64.39
VIT_17s0000g08560.t01	Wine grape	plastid	54.72	63.66
CDY12390	Canola	plastid	52.62	62.44
Bra038952.1-P	Field mustard	plastid	52.83	62.22
CDY47555	Canola	plastid	52.83	61.92
AT5G33320.1	Thale cress	plastid	52.2	61.03
EES17796	Sorghum	plastid	45.7	54.36
KXG31751	Sorghum	plastid	44.44	50.48
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	22.43	42.97
EES13461	Sorghum	plastid	29.14	35.92
EER99986	Sorghum	plastid	26.42	31.03
OQU77692	Sorghum	plastid	26.83	30.77

Protein Annotations

MapMan:24.2.1.1.1	UniProt:A0A1W0W474	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0009670	GO:GO:0015121	GO:GO:0015714	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0035436	GO:GO:0055085	GO:GO:0089722	EnsemblPlants:OQU89208	ProteinID:OQU89208
ProteinID:OQU89208.1	PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF2	EnsemblPlantsGene:SORBI_3002G159900	SUPFAM:SSF103481
InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI0009DC8A02	SEG:seg

Description

hypothetical protein

Coordinates

chr2:-:49423486..49433486

Molecular Weight (calculated)

50525.5 Da

IEP (calculated)

11.213

GRAVY (calculated)

0.395

Length

477 amino acids

Sequence
(BLAST)

001: MSLAQIATAQ RGLVAALKAR PPPNLAHCPS TPPPPASNAR PHQPRRNLVL SASASAASSP PPASSRAPLF GGEARGPISS AGRAMQSAAA VGLVRPCAAR
101: PLPTYPSPRR GAGACSPPLL TTPRGLRLSA RAGLVPASPL EEENRRCRHV AAAAGKVAAA DTAGEEAGGG LAKTLQLGAL FGLWYLFNIY FNIYNKQVLK
201: VLPYPINITT VQFAVGSAIA LFMWITGILK RPKISGAQLF AILPLAIVHT MGNLFTNMSL GKVAVSFTHT IKAMEPFFSV LLSAIFLGEL PTPWVVLSLL
301: PIVGGVALAS LTEASFNWAG FWSAMASNVT FQSRNVLSKK LMVKKEESLD NINLFSIITV MSFFLLAPVT LLTEGVKVSP AVLQSAGLNL KQVYTRSLIA
401: AFCFHAYQQV SYMILARVSP VTHSVGNCVK RVVVIVTSVL FFRTPVSPIN SLGTGIALAG VFLYSQLKRL KPKPKAA

Best Arabidopsis Sequence Match ( AT5G33320.1 )
(BLAST)

001: MQSSAVFSLS PSLPLLKPRR LSLRHHPITT AASSSDLNVS PNVVSIPSLS RRSWRLASSD SPLRAWSGVP SPISHSLDTN RFRTAATAVP ESAEEGDNSG
101: KLTKVLELGL LFAMWYLFNI YFNIYNKQVL KALHAPMTVT LVQFAVGSVL ITIMWVLNLY KRPKISGAQL AAILPLAVVH TLGNLFTNMS LGKVSVSFTH
201: TIKAMEPFFS VLLSAMFLGE KPTPWVLGAI VPIVGGVALA SISEVSFNWA GFSSAMASNL TNQSRNVLSK KVMVKKDDSL DNITLFSIIT LMSLVLMAPV
301: TFFTEGIKFT PSYIQSAGVN VKQIYTKSLI AALCFHAYQQ VSYMILARVS PVTHSVGNCV KRVVVIVSSV IFFKTPVSPV NAFGTGIALA GVFLYSRVKG
401: IKPKPKTA

Arabidopsis Description

PPT1Phosphoenolpyruvate/phosphate translocator 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.