CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d000021_P002	Maize	plastid	98.19	96.45
Zm00001d049441_P001	Maize	plastid	95.87	95.87
Os08t0187800-01	Rice	plastid	91.99	91.99
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	56.07	87.15
TraesCS7A01G287500.1	Wheat	golgi, unclear	86.3	86.75
HORVU7Hr1G062510.10	Barley	plastid	85.27	85.49
TraesCS7D01G288100.2	Wheat	plastid	86.3	85.2
TraesCS7B01G178500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	86.05	69.09
EES07792	Sorghum	plastid	35.14	34.26
EER99986	Sorghum	plastid	34.11	32.51
EES17796	Sorghum	plastid	33.33	32.17
OQU77692	Sorghum	plastid	34.37	31.97
KXG31751	Sorghum	plastid	32.3	29.76
OQU89208	Sorghum	plastid	35.92	29.14

Protein Annotations

MapMan:24.2.1.1.1	EntrezGene:8085008	UniProt:A5Y3J9	ProteinID:ABK91081.1	ProteinID:ABK91083.1	ProteinID:ABK91088.1
ProteinID:ABK91090.1	ProteinID:ABK91092.1	ProteinID:ABK91095.1	ProteinID:ABK91099.1	ProteinID:ABK91101.1	EnsemblPlants:EES13461
ProteinID:EES13461	ProteinID:EES13461.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	PFAM:PF03151
PANTHER:PTHR43973	PANTHER:PTHR43973:SF4	EnsemblPlantsGene:SORBI_3007G065500	SUPFAM:SSF103481	unigene:Sbi.5331	InterPro:Sugar_P_trans_dom
TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI00015661CD	RefSeq:XP_002443966.1	SEG:seg

Description

hypothetical protein

Coordinates

chr7:+:6967733..6971901

Molecular Weight (calculated)

42168.1 Da

IEP (calculated)

10.338

GRAVY (calculated)

0.461

Length

387 amino acids

Sequence
(BLAST)

001: MIPSVRLSPG PAAFSGSSLR SKLPSIPSIS SLKPSKYVVS SLKPLYLAPL DGPRTAELKS RRQPLEFRCA ASAADDKESK TKAVPVQSEG AQRLKISIYF
101: ATWWALNVIF NIYNKKVLNA FPYPWLTSTL SLACGSAMML FSWATRLVEA PKTDLDFWKV LFPVAVAHTI GHVAATVSMS KVAVSFTHII KSAEPAFSVL
201: VSRFILGETF PVPVYLSLLP IIGGCALAAV TELNFNMVGF MGAMISNLAF VFRNIFSKRG MKGKSVSGMN YYACLSIMSL VILTPFAIAM EGPQMWAAGW
301: QKALAEVGPN VIWWIAAQSV FYHLYNQVSY MSLDQISPLT FSIGNTMKRI SVIVSSIIIF HTPVRPVNAL GAAIAILGTF LYSQAKA

Best Arabidopsis Sequence Match ( AT1G61800.1 )
(BLAST)

001: MLSSIKPSSS SFSTAISGSV RRSIPTKLKF SPLLIIKNCH NQSFNANVVS HQKPLHISSA SNFKREVKVE AYEADRSRPL DINIELPDEQ SAQKLKIGIY
101: FATWWALNVV FNIYNKKVLN AFPYPWLTST LSLACGSLMM LVSWATRIAD APKTDLEFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFFMGET FPLPVYLSLL PIIGGCALAA ITELNFNITG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMMS LVILTPFSIA VEGPQMWAAG
301: WQNAVSQVGP NFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSIGNTMKR ISVIVASIII FHTPIQPVNA LGAAIAIFGT FLYSQAKQ

Arabidopsis Description

GPT2glucose-6-phosphate/phosphate translocator 2 [Source:TAIR;Acc:AT1G61800]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.