Factsheet for TraesCS7A01G287500.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi, unclear

Predictor Summary:

plastid 7
plasma membrane 1

Predictors

GFP

MS/MS

Papers

golgi: 25769308
unclear: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G288100.2	Wheat	plastid	98.18	96.43
HORVU7Hr1G062510.10	Barley	plastid	94.29	94.04
Os08t0187800-01	Rice	plastid	87.27	86.82
EES13461	Sorghum	plastid	86.75	86.3
Zm00001d049441_P001	Maize	plastid	85.19	84.75
Zm00001d000021_P002	Maize	plastid	86.23	84.26
TraesCS7B01G178500.1	Wheat	cytosol, peroxisome, plasma membrane, plastid	97.92	78.22
TraesCS2A01G220400.1	Wheat	plastid	70.91	71.09
TraesCS1A01G075700.2	Wheat	plastid	35.06	33.33
TraesCS5A01G178100.1	Wheat	plastid	34.29	32.92
TraesCS1A01G115200.1	Wheat	plastid	33.77	31.94
TraesCS3A01G161300.1	Wheat	golgi	33.51	31.23
TraesCS3A01G130300.1	Wheat	plastid	31.43	30.48

Protein Annotations

EnsemblPlants:TraesCS7A01G287500.1	EnsemblPlantsGene:TraesCS7A01G287500	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:Sugar_P_trans_dom
InterPro:Tpt_PEP_transl	PANTHER:PTHR43973	PANTHER:PTHR43973:SF4	PFAM:PF03151	SEG:seg	SUPFAM:SSF103481
TIGRFAMs:TIGR00817	TMHMM:TMhelix	MapMan:24.2.1.1.1	:	:	:

Description

No Description!

Coordinates

chr7A:+:342806611..342809298

Molecular Weight (calculated)

42288.1 Da

IEP (calculated)

9.955

GRAVY (calculated)

0.466

Length

385 amino acids

Sequence
(BLAST)

001: MIPAVKLSPA AFSVTNQRSK SAFVPSVSIL NMKKFASCSL RPLYLTWLDD PHTSELKPRR QLLDFRCAAS AADDKESKAE VLPASSEAAQ KLKISIYFAT
101: WWALNVIFNI YNKKVLNAFP YPWLTSTLSL ACGSAMMLFS WVTCLVEAPK TDLDFWKALF PVAVAHTIGH VAATVSMSKV AVSFTHIIKS AEPAFSVLVS
201: RFILGESFPM PVYLSLLPII GGCGLAAATE LNFNMIGFMG AMISNLAFVF RNIFSKRGMK GKSVSGMNYY ACLSIMSLVI LTPFAIAMEG PQMWATGWQK
301: ALADVGPNVL WWIGAQSVFY HLYNQVSYMS LDQISPLTFS IGNTMKRISV IVSSIIIFRT PVRPVNALGA AIAIFGTFLY SQAKQ

Best Arabidopsis Sequence Match ( AT1G61800.1 )
(BLAST)

001: MLSSIKPSSS SFSTAISGSV RRSIPTKLKF SPLLIIKNCH NQSFNANVVS HQKPLHISSA SNFKREVKVE AYEADRSRPL DINIELPDEQ SAQKLKIGIY
101: FATWWALNVV FNIYNKKVLN AFPYPWLTST LSLACGSLMM LVSWATRIAD APKTDLEFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFFMGET FPLPVYLSLL PIIGGCALAA ITELNFNITG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMMS LVILTPFSIA VEGPQMWAAG
301: WQNAVSQVGP NFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSIGNTMKR ISVIVASIII FHTPIQPVNA LGAAIAIFGT FLYSQAKQ

Arabidopsis Description

GPT2glucose-6-phosphate/phosphate translocator 2 [Source:TAIR;Acc:AT1G61800]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.