Factsheet for TraesCS3A01G130300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G131200.1	Wheat	plastid	97.73	97.49
TraesCS3B01G149400.1	Wheat	plastid	95.97	95.49
Os01t0172100-01	Rice	plastid	76.32	77.1
Zm00001d039674_P001	Maize	plastid	75.82	72.53
KXG31751	Sorghum	plastid	76.57	72.38
HORVU3Hr1G024590.1	Barley	peroxisome	71.28	69.19
TraesCS1A01G115200.1	Wheat	plastid	62.97	61.43
TraesCS5A01G178100.1	Wheat	plastid	53.15	52.62
KRG93252	Soybean	plastid	52.64	51.23
PGSC0003DMT400001273	Potato	plastid	50.13	50.13
Solyc02g086650.2.1	Tomato	plastid	49.87	49.87
AT3G01550.1	Thale cress	mitochondrion, plastid	47.36	49.09
Bra001003.1-P	Field mustard	plastid	46.85	48.82
CDX74305	Canola	plastid	46.85	48.69
CDX91942	Canola	plastid	46.1	47.78
VIT_14s0066g01000.t01	Wine grape	mitochondrion, plastid	49.62	45.71
TraesCS7A01G287500.1	Wheat	golgi, unclear	30.48	31.43
TraesCS2A01G220400.1	Wheat	plastid	30.23	31.25
TraesCS3A01G161300.1	Wheat	golgi	28.97	27.84
TraesCS1A01G075700.2	Wheat	plastid	27.96	27.41

Protein Annotations

MapMan:24.2.1.1.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0015121	GO:GO:0015714	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0035436
GO:GO:0055085	GO:GO:0071917	PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF5	SUPFAM:SSF103481
InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	EnsemblPlantsGene:TraesCS3A01G130300	EnsemblPlants:TraesCS3A01G130300.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr3A:-:107403145..107405105

Molecular Weight (calculated)

42046.8 Da

IEP (calculated)

10.367

GRAVY (calculated)

0.585

Length

397 amino acids

Sequence
(BLAST)

001: MQRAAASLAS SRSAAWACST TSRHAAASCS AAARRDAVVP LRIRGQEQRP AALPMSLSLL SGSRPPRTAK AAAAAAELAP ADEVAAGGGI AGTVQLGAMI
101: VAWYLLNIYF NIYNKQVLQV LPLPLPYTIT AFQLAFGSLV IFFMWAAKLH PVPKLSAAQL AKIAPLAAGH MLGTVFTNMS LGKVAVSFTH TVKASEPFFT
201: VLLSAFFLGE VPSPLVLGSL VPIVGGVALA SLTEVSFNWV GFWSAMASNL LNQTRNVLSK RLLGGEEEEF MDDINLFSVI TVLSFLLSLP LMIFAEGVSF
301: SPAFLQSTGL NLQELCVRAA LAGLCFHGYQ KLSYMILARV SPVTHSVANC VKRVVVIVSS VLFFRTPISP VNALGTGAAL AGVYLYSRLK KAKPKSS

Best Arabidopsis Sequence Match ( AT5G33320.1 )
(BLAST)

001: MQSSAVFSLS PSLPLLKPRR LSLRHHPITT AASSSDLNVS PNVVSIPSLS RRSWRLASSD SPLRAWSGVP SPISHSLDTN RFRTAATAVP ESAEEGDNSG
101: KLTKVLELGL LFAMWYLFNI YFNIYNKQVL KALHAPMTVT LVQFAVGSVL ITIMWVLNLY KRPKISGAQL AAILPLAVVH TLGNLFTNMS LGKVSVSFTH
201: TIKAMEPFFS VLLSAMFLGE KPTPWVLGAI VPIVGGVALA SISEVSFNWA GFSSAMASNL TNQSRNVLSK KVMVKKDDSL DNITLFSIIT LMSLVLMAPV
301: TFFTEGIKFT PSYIQSAGVN VKQIYTKSLI AALCFHAYQQ VSYMILARVS PVTHSVGNCV KRVVVIVSSV IFFKTPVSPV NAFGTGIALA GVFLYSRVKG
401: IKPKPKTA

Arabidopsis Description

PPT1Phosphoenolpyruvate/phosphate translocator 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.