Factsheet for PGSC0003DMT400001273

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 10
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
PGSC0003DMT400015077
PGSC0003DMT400050482

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01550.1	PGSC0003DMT400015077	AT5G22290.1	21798944
AT3G01550.1	PGSC0003DMT400050482	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g086650.2.1	Tomato	plastid	94.46	94.46
Os05t0170950-00	Rice	endoplasmic reticulum	15.37	67.03
Bra001003.1-P	Field mustard	plastid	59.45	61.94
CDX74305	Canola	plastid	59.45	61.78
KRG93252	Soybean	plastid	63.48	61.76
CDX91942	Canola	plastid	58.44	60.57
AT3G01550.1	Thale cress	mitochondrion, plastid	58.44	60.57
VIT_14s0066g01000.t01	Wine grape	mitochondrion, plastid	64.23	59.16
Zm00001d017901_P001	Maize	cytosol, plasma membrane, plastid	15.87	57.27
PGSC0003DMT400046741	Potato	plastid	55.92	54.15
Os01t0172100-01	Rice	plastid	51.89	52.42
EES17796	Sorghum	plastid	52.39	51.87
TraesCS1A01G115200.1	Wheat	plastid	51.89	50.61
TraesCS1D01G116600.1	Wheat	plastid	51.39	50.49
TraesCS1B01G135100.1	Wheat	plastid	52.14	50.49
TraesCS3D01G131200.1	Wheat	plastid	50.38	50.25
TraesCS3A01G130300.1	Wheat	plastid	50.13	50.13
HORVU1Hr1G025390.3	Barley	plastid	51.39	50.12
TraesCS3B01G149400.1	Wheat	plastid	50.13	49.87
Zm00001d039674_P001	Maize	plastid	50.63	48.43
KXG31751	Sorghum	plastid	50.38	47.62
Zm00001d037659_P001	Maize	plastid	50.13	46.6
HORVU3Hr1G024590.1	Barley	peroxisome	46.1	44.74
PGSC0003DMT400014284	Potato	mitochondrion	14.36	39.58
Zm00001d034088_P001	Maize	extracellular	25.44	35.94
Zm00001d051000_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	19.65	34.98
PGSC0003DMT400002701	Potato	plastid	33.0	33.08
Zm00001d044715_P001	Maize	cytosol, plasma membrane, plastid	22.67	32.85
PGSC0003DMT400065527	Potato	plastid	33.5	32.84
PGSC0003DMT400013500	Potato	plastid	32.75	32.42
PGSC0003DMT400094749	Potato	plastid	33.5	31.52
PGSC0003DMT400058772	Potato	plastid	32.49	31.08

Protein Annotations

EntrezGene:102597346	MapMan:24.2.1.1.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0015120	GO:GO:0015121	GO:GO:0015713	GO:GO:0015714	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	GO:GO:0089722	UniProt:M0ZI76	PFAM:PF03151
EnsemblPlantsGene:PGSC0003DMG400000484	PGSC:PGSC0003DMG400000484	EnsemblPlants:PGSC0003DMT400001273	PANTHER:PTHR43973	PANTHER:PTHR43973:SF6	SUPFAM:SSF103481
InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI000294970A	RefSeq:XP_006338579.1
SEG:seg	:	:	:	:	:

Description

Triose phosphate/phosphate translocator, non-green plastid, chloroplast [Source:PGSC_GENE;Acc:PGSC0003DMG400000484]

Coordinates

chr2:-:47200312..47203846

Molecular Weight (calculated)

43812.5 Da

IEP (calculated)

10.397

GRAVY (calculated)

0.445

Length

397 amino acids

Sequence
(BLAST)

001: MGTSTFYMSL PTPFLKPQKP SNQIFITGSN KFNSALQHYA LHKPKSCSIK KTSVPILVKN SCKLDLFKVR AVAESAGESE AVKPKEVIQT LQLGAMFGIW
101: YLLNICYNIY NKQVLKVFPF PATVTASQFG CGTLLILFMW GFRLHPIPKI SKSQFKAIFT LAAIHTLGNV LTNISLGRVA VSFTHTIKAM EPFFTVLLST
201: LFLAERPSPW IVSSLVPIIG GVALASMTEA SFNWIGFGSA MASNLTNQSR NVFSKKFMDK EEEALDNINL FSMITIISFI LLVPVAILME GVKLTPSYLQ
301: YTAASHGLHV RELCVRLLLA GFCLHSYQQV SYMILQMVSP VTHAVGNCVK RVVVIVSSVI FFQTPVSPIN SLGTALALAG VFLYSRVKRL QRKPKVA

Best Arabidopsis Sequence Match ( AT3G01550.1 )
(BLAST)

001: MFALTFLNPN PRLPSPLFLA KSTPESALSR RSRAFSSSNS YPWRPNLRFN GFKLKSATVP ENVEGGDLES GSLVKGLKLG GMFGVWYLLN IYYNIFNKQV
101: LRVYPYPATV TAFQLGCGTL MIAIMWLLKL HPRPKFSPSQ FTVIVQLAVA HTLGNLLTNV SLGRVNVSFT HTIKAMEPFF TVLLSVLLLG EWPSLWIVCS
201: LLPIVAGVSL ASFTEASFNW IGFCSAMASN VTNQSRNVLS KKFMVGKDAL DNINLFSIIT IISFILLVPL AILIDGFKVT PSHLQVATSQ GLSVKEFCIM
301: SLLAGVCLHS YQQVSYMILE MVSPVTHSVG NCVKRVVVIT SSILFFKTPV SPLNSIGTAT ALAGVYLYSR AKRVQVKPNP KMS

Arabidopsis Description

PPT2Phosphoenolpyruvate/phosphate translocator 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0T6]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.