Factsheet for HORVU1Hr1G025390.3

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 4
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G115200.1	Wheat	plastid	96.56	96.56
TraesCS1D01G116600.1	Wheat	plastid	95.58	96.29
TraesCS1B01G135100.1	Wheat	plastid	96.56	95.85
Os05t0170950-00	Rice	endoplasmic reticulum	20.39	91.21
EES17796	Sorghum	plastid	78.87	80.05
Zm00001d017901_P001	Maize	cytosol, plasma membrane, plastid	20.64	76.36
Zm00001d037659_P001	Maize	plastid	79.36	75.64
KRG93252	Soybean	plastid	54.3	54.17
Bra001003.1-P	Field mustard	plastid	48.16	51.44
AT3G01550.1	Thale cress	mitochondrion, plastid	48.4	51.44
PGSC0003DMT400001273	Potato	plastid	50.12	51.39
Solyc02g086650.2.1	Tomato	plastid	50.12	51.39
CDX74305	Canola	plastid	48.16	51.31
HORVU3Hr1G024590.1	Barley	peroxisome	50.86	50.61
CDX91942	Canola	plastid	47.42	50.39
VIT_14s0066g01000.t01	Wine grape	mitochondrion, plastid	51.84	48.96
Zm00001d044715_P001	Maize	cytosol, plasma membrane, plastid	32.43	48.18
HORVU5Hr1G054180.1	Barley	mitochondrion, plastid	50.61	46.29
Zm00001d051000_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	24.32	44.39
Zm00001d034088_P001	Maize	extracellular	30.47	44.13
HORVU3Hr1G032490.1	Barley	golgi, plasma membrane	27.52	33.04
HORVU7Hr1G062510.10	Barley	plastid	30.96	32.64
HORVU2Hr1G045900.2	Barley	plastid	32.19	28.79
HORVU1Hr1G016360.1	Barley	plastid	28.26	28.33

Protein Annotations

MapMan:24.2.1.1.1	EMBL:AK355303	EMBL:AK365164	UniProt:F2CUK1	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	EnsemblPlantsGene:HORVU1Hr1G025390	EnsemblPlants:HORVU1Hr1G025390.3	PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF6
SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI000200489E
SEG:seg	:	:	:	:	:

Description

Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2CUK1]

Coordinates

chrchr1H:-:123301589..123308634

Molecular Weight (calculated)

43695.1 Da

IEP (calculated)

10.660

GRAVY (calculated)

0.503

Length

407 amino acids

Sequence
(BLAST)

001: MQSMAASYSA SRGWAAARRC PSPSLPARHV AFSSSSSSRC PVAGAGAPVL PLGIRGGRLL LPCPLLPAGG KNGSSARRTT ATAAAASPSA EGDGKLEAAG
101: IPRTLQLGAM ILVWYLLNIY FNICNKLVLK AVPFPYTITT FQFASGSFFI TLMWLLNLHP KPRLSLQQYA KILPLALIHM MGNVFTNMSL GKVAVSFTHT
201: IKAMEPFFSV LFSVLLLGQT PSLLVVGSLV PVVGGVVLAS MTEVSFNWIG FWSAMASNVT NQSRNVFSKK LLADKEETLD DINLFSIMTV MSFLLSVPLM
301: LYLEGIKFSP SYLQSTGVNL QELCVKAAIA GTCFHFYQQV SYSLLARISP VTHSVANSVK RVVVIVSSVI FFRTPISPIN ALGTGLALLG VFLYSRFKKA
401: KPKAKAA

Best Arabidopsis Sequence Match ( AT5G33320.1 )
(BLAST)

001: MQSSAVFSLS PSLPLLKPRR LSLRHHPITT AASSSDLNVS PNVVSIPSLS RRSWRLASSD SPLRAWSGVP SPISHSLDTN RFRTAATAVP ESAEEGDNSG
101: KLTKVLELGL LFAMWYLFNI YFNIYNKQVL KALHAPMTVT LVQFAVGSVL ITIMWVLNLY KRPKISGAQL AAILPLAVVH TLGNLFTNMS LGKVSVSFTH
201: TIKAMEPFFS VLLSAMFLGE KPTPWVLGAI VPIVGGVALA SISEVSFNWA GFSSAMASNL TNQSRNVLSK KVMVKKDDSL DNITLFSIIT LMSLVLMAPV
301: TFFTEGIKFT PSYIQSAGVN VKQIYTKSLI AALCFHAYQQ VSYMILARVS PVTHSVGNCV KRVVVIVSSV IFFKTPVSPV NAFGTGIALA GVFLYSRVKG
401: IKPKPKTA

Arabidopsis Description

PPT1Phosphoenolpyruvate/phosphate translocator 1, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8RXN3]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.