Factsheet for TraesCS1D01G116600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G115200.1	Wheat	plastid	98.02	97.3
TraesCS1B01G135100.1	Wheat	plastid	97.28	95.85
HORVU1Hr1G025390.3	Barley	plastid	96.29	95.58
Os05t0170950-00	Rice	endoplasmic reticulum	20.54	91.21
EES17796	Sorghum	plastid	79.21	79.8
Zm00001d017901_P001	Maize	cytosol, plasma membrane, plastid	20.54	75.45
Zm00001d037659_P001	Maize	plastid	79.21	74.94
TraesCS3D01G131200.1	Wheat	plastid	61.14	62.06
KRG93252	Soybean	plastid	54.46	53.92
TraesCS5D01G182500.1	Wheat	plastid	51.73	52.12
PGSC0003DMT400001273	Potato	plastid	50.49	51.39
Solyc02g086650.2.1	Tomato	plastid	50.49	51.39
Bra001003.1-P	Field mustard	plastid	48.02	50.92
CDX74305	Canola	plastid	48.02	50.79
AT3G01550.1	Thale cress	mitochondrion, plastid	48.02	50.65
CDX91942	Canola	plastid	47.28	49.87
VIT_14s0066g01000.t01	Wine grape	mitochondrion, plastid	51.98	48.72
Zm00001d044715_P001	Maize	cytosol, plasma membrane, plastid	31.93	47.08
Zm00001d051000_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	24.5	44.39
Zm00001d034088_P001	Maize	extracellular	30.45	43.77
TraesCS7D01G288100.2	Wheat	plastid	30.69	31.63
TraesCS2D01G226000.2	Wheat	plastid	32.43	29.57
TraesCS3D01G168600.1	Wheat	mitochondrion	28.47	28.61
TraesCS1D01G078000.1	Wheat	plastid	28.22	28.08

Protein Annotations

EnsemblPlants:TraesCS1D01G116600.1	EnsemblPlantsGene:TraesCS1D01G116600	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:Sugar_P_trans_dom
InterPro:Tpt_PEP_transl	PANTHER:PTHR43973	PANTHER:PTHR43973:SF6	PFAM:PF03151	SEG:seg	SUPFAM:SSF103481
TIGRFAMs:TIGR00817	TMHMM:TMhelix	MapMan:24.2.1.1.1	:	:	:

Description

No Description!

Coordinates

chr1D:+:112461917..112466355

Molecular Weight (calculated)

43345.6 Da

IEP (calculated)

10.726

GRAVY (calculated)

0.466

Length

404 amino acids

Sequence
(BLAST)

001: MQSMAASSSS SRGWAAVRRC PSPSLSARHV AFSSSSSSRC PVAGAGAPVL PLGIRGGRLP LPCPLLPPGG KNGASARRAT AAAAPSAEGD GKPEAGGIPR
101: TLQLGAMILV WYLLNIYFNI YNKLVLKAVP FPYTITTFQF ASGSFFITLM WLLNLHPKPR LSLQQYAKIL PLALIHMMGN VFTNMSLGKV AVSFTHTIKA
201: MEPFFSVLFS VLLLGQTPSL LAVGSLVPVV GGVVLASMTE VSFNWIGFWS AMASNVTNQS RNVFSKKLLA DKEETLDDIN LFSIMTVMSF LLSVPLMLYL
301: EGIKFSPSYV QSTGVNLQEL CVKAAIAGTC FHFYQQVSYS LLARISPVTH SVANSVKRVV VIVSSVIFFR TPISPINALG TGLALLGVFL YSRFKKAKPK
401: AKAA

Best Arabidopsis Sequence Match ( AT3G01550.1 )
(BLAST)

001: MFALTFLNPN PRLPSPLFLA KSTPESALSR RSRAFSSSNS YPWRPNLRFN GFKLKSATVP ENVEGGDLES GSLVKGLKLG GMFGVWYLLN IYYNIFNKQV
101: LRVYPYPATV TAFQLGCGTL MIAIMWLLKL HPRPKFSPSQ FTVIVQLAVA HTLGNLLTNV SLGRVNVSFT HTIKAMEPFF TVLLSVLLLG EWPSLWIVCS
201: LLPIVAGVSL ASFTEASFNW IGFCSAMASN VTNQSRNVLS KKFMVGKDAL DNINLFSIIT IISFILLVPL AILIDGFKVT PSHLQVATSQ GLSVKEFCIM
301: SLLAGVCLHS YQQVSYMILE MVSPVTHSVG NCVKRVVVIT SSILFFKTPV SPLNSIGTAT ALAGVYLYSR AKRVQVKPNP KMS

Arabidopsis Description

PPT2Phosphoenolpyruvate/phosphate translocator 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0T6]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.