CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH22653
KRH26664

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G01550.1	KRH22653	AT5G22290.1	21798944
AT3G01550.1	KRH26664	AT5G22290.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0170950-00	Rice	endoplasmic reticulum	14.95	67.03
PGSC0003DMT400001273	Potato	plastid	61.76	63.48
Solyc02g086650.2.1	Tomato	plastid	61.76	63.48
KRH03277	Soybean	plastid	56.37	60.21
VIT_14s0066g01000.t01	Wine grape	mitochondrion, plastid	63.48	60.09
Zm00001d017901_P001	Maize	cytosol, plasma membrane, plastid	16.18	60.0
Bra001003.1-P	Field mustard	plastid	55.39	59.32
CDX74305	Canola	plastid	55.39	59.16
AT3G01550.1	Thale cress	mitochondrion, plastid	55.15	58.75
CDX91942	Canola	plastid	54.41	57.96
KRH63546	Soybean	endoplasmic reticulum, mitochondrion, plastid	55.15	56.82
KRH54382	Soybean	endoplasmic reticulum, mitochondrion, plastid	55.88	56.16
Os01t0172100-01	Rice	plastid	52.7	54.71
TraesCS1D01G116600.1	Wheat	plastid	53.92	54.46
TraesCS1B01G135100.1	Wheat	plastid	54.66	54.39
HORVU1Hr1G025390.3	Barley	plastid	54.17	54.3
TraesCS1A01G115200.1	Wheat	plastid	54.17	54.3
EES17796	Sorghum	plastid	53.19	54.11
TraesCS3A01G130300.1	Wheat	plastid	51.23	52.64
TraesCS3B01G149400.1	Wheat	plastid	51.23	52.38
TraesCS3D01G131200.1	Wheat	plastid	50.98	52.26
Zm00001d039674_P001	Maize	plastid	52.21	51.33
KXG31751	Sorghum	plastid	52.21	50.71
Zm00001d037659_P001	Maize	plastid	50.49	48.24
HORVU3Hr1G024590.1	Barley	peroxisome	46.32	46.21
Zm00001d051000_P001	Maize	cytosol, endoplasmic reticulum, plasma membrane	20.1	36.77
Zm00001d034088_P001	Maize	extracellular	24.75	35.94
Zm00001d044715_P001	Maize	cytosol, plasma membrane, plastid	23.77	35.4
KRH20881	Soybean	plastid	32.35	33.76
KRH11399	Soybean	plastid	32.35	33.76
KRG98852	Soybean	plastid	32.35	33.5
KRH32944	Soybean	plastid	34.31	33.41
KRH46103	Soybean	mitochondrion	32.11	33.16
KRH13965	Soybean	plastid	33.82	33.01
KRH73710	Soybean	plastid	31.37	32.41
KRH14442	Soybean	plastid	31.37	32.41
KRH50117	Soybean	mitochondrion, plastid	30.15	30.3
KRH20388	Soybean	plastid	30.15	30.3
KRH75852	Soybean	cytosol, endoplasmic reticulum, plastid	20.34	23.45
KRH02096	Soybean	plastid	32.6	22.02

Protein Annotations

MapMan:24.2.1.1.1	EMBL:ACUP02011545	EnsemblPlantsGene:GLYMA_19G005900	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085
UniProt:I1N5H8	EnsemblPlants:KRG93252	ProteinID:KRG93252	ProteinID:KRG93252.1	ProteinID:KRG93253.1	PFAM:PF03151
PANTHER:PTHR43973	PANTHER:PTHR43973:SF6	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix
InterPro:Tpt_PEP_transl	UniParc:UPI0001BA89C3	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr19:+:537642..545561

Molecular Weight (calculated)

44266.3 Da

IEP (calculated)

10.070

GRAVY (calculated)

0.472

Length

408 amino acids

Sequence
(BLAST)

001: MSPYSLSLLA SVSPKMHTLL SFSSSHSPHL PNHNITKSNN KLSHSINGLS SCPSSPLLPS ATKSSPFLIS TSKIASFRVL AASSIPDARS DEPAKTSDFL
101: KTLQLGAMFA TWYLLNIYYN IYNKQVLKVY PFPATITAFQ FGFASLVINL VWTLNLHPRP SISGSQFAAI LPLAVAHTMG NLLTNISLGK VAVSFTHTIK
201: AMEPFFTVVL SALLLGEMPT FWVVSSLVPV VGGVALASMT EVSFNWIGFT TAMASNVTNQ SRNVLSKKLM TNEEETLDNI NLYSVITIIS FLLLVPCAIL
301: VEGVKFSPSY LQSAASQGLN VRELCVRSVL AAFCFHAYQQ VSYMILQMVS PVTHSVGNCV KRVVVIVSSV IFFQIPVSPV NTLGTGLALV GVFLYSRAKR
401: IKSVQKTN

Best Arabidopsis Sequence Match ( AT3G01550.1 )
(BLAST)

001: MFALTFLNPN PRLPSPLFLA KSTPESALSR RSRAFSSSNS YPWRPNLRFN GFKLKSATVP ENVEGGDLES GSLVKGLKLG GMFGVWYLLN IYYNIFNKQV
101: LRVYPYPATV TAFQLGCGTL MIAIMWLLKL HPRPKFSPSQ FTVIVQLAVA HTLGNLLTNV SLGRVNVSFT HTIKAMEPFF TVLLSVLLLG EWPSLWIVCS
201: LLPIVAGVSL ASFTEASFNW IGFCSAMASN VTNQSRNVLS KKFMVGKDAL DNINLFSIIT IISFILLVPL AILIDGFKVT PSHLQVATSQ GLSVKEFCIM
301: SLLAGVCLHS YQQVSYMILE MVSPVTHSVG NCVKRVVVIT SSILFFKTPV SPLNSIGTAT ALAGVYLYSR AKRVQVKPNP KMS

Arabidopsis Description

PPT2Phosphoenolpyruvate/phosphate translocator 2, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q8H0T6]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.