CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 11

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH13965	Soybean	plastid	95.23	95.45
VIT_15s0024g01440.t01	Wine grape	plastid	70.88	69.56
Bra013962.1-P	Field mustard	plastid	65.63	68.58
CDY38448	Canola	plastid	65.63	68.41
CDY16905	Canola	plastid	65.39	68.33
Solyc01g081390.2.1	Tomato	plastid	67.54	67.06
PGSC0003DMT400094749	Potato	plastid	67.54	67.06
AT5G17630.1	Thale cress	plastid	66.59	66.91
GSMUA_Achr6P01190_001	Banana	plastid	58.23	55.2
KRH11399	Soybean	plastid	42.0	45.01
KRH20881	Soybean	plastid	41.77	44.76
KRG98852	Soybean	plastid	41.05	43.65
KRH14442	Soybean	plastid	41.05	43.54
KRH73710	Soybean	plastid	41.05	43.54
KRH46103	Soybean	mitochondrion	40.81	43.29
KRH63546	Soybean	endoplasmic reticulum, mitochondrion, plastid	33.41	35.35
KRH03277	Soybean	plastid	31.74	34.82
KRH54382	Soybean	endoplasmic reticulum, mitochondrion, plastid	33.65	34.73
KRG93252	Soybean	plastid	33.41	34.31
KRH20388	Soybean	plastid	33.17	34.24
KRH50117	Soybean	mitochondrion, plastid	33.17	34.24
KRH02096	Soybean	plastid	42.48	29.47
KRH75852	Soybean	cytosol, endoplasmic reticulum, plastid	24.11	28.53

Protein Annotations

EntrezGene:100779531	MapMan:24.2.1.1.1	MapMan:9.1.2.1.2	EMBL:ACUP02006208	EnsemblPlantsGene:GLYMA_10G088400	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021
GO:GO:0022857	GO:GO:0055085	UniProt:K7LI69	EnsemblPlants:KRH32944	ProteinID:KRH32944	ProteinID:KRH32944.1
PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF7	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817
TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI000233D53B	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:-:11760648..11761907

Molecular Weight (calculated)

46693.1 Da

IEP (calculated)

10.180

GRAVY (calculated)

0.307

Length

419 amino acids

Sequence
(BLAST)

001: MLSSNVIPSS SPVTFSKPNH HFFINASPNL KPNPLRRFEA QHRATPLKSF KLSFIPTSQI QPSIAKLGSF SRFLSHPFEL SSKPRYEIVK AASEANPEGE
101: NVTPTDPKSK NLKLGLVFGL WYFQNIVFNI YNKKVLNIFP FPWLLASFQL FVGSIWMLVL WSLKLQPCPK ISKPFIIALL GPALFHTIGH ISACVSFSKV
201: AVSFTHVIKS AEPVFSVIFS SVLGDKYPTQ VWLSIIPIVL GCSLAAVTEV SFNVQGLWCA LISNVGFVLR NIYSKRSLEN FKEVDGLNLY GWITILSLLY
301: LFPVAIFVEG SQWIPGYYKA IEAIGKASTF YTWVLVSGVF YHLYNQSSYQ ALDEISPLTF SVGNTMKRVV VIVSSVLVFR NPVRPLNGLG SAIAILGTFL
401: YSQATSKKKA QKIEDEKTS

Best Arabidopsis Sequence Match ( AT5G17630.1 )
(BLAST)

001: MISLNLSPSL NPGLLHKTRT CQQPTRLSAL LVTNPKPFNH RHPLGLSPIP NLQIRDVSAK PLLSLTNPES SSGFSRKPRS IAAVGSSDSN PDEKSDLGEA
101: EKKEKKAKTL QLGIVFGLWY FQNIVFNIFN KKALNVFPYP WLLASFQLFA GSIWMLVLWS FKLYPCPKIS KPFIIALLGP ALFHTIGHIS ACVSFSKVAV
201: SFTHVIKSAE PVFSVIFSSL LGDSYPLAVW LSILPIVMGC SLAAVTEVSF NLGGLSGAMI SNVGFVLRNI YSKRSLQSFK EIDGLNLYGC ISILSLLYLF
301: PVAIFVEGSH WVPGYHKAIA SVGTPSTFYF WVLLSGVFYH LYNQSSYQAL DEISPLTFSV GNTMKRVVVI ISTVLVFRNP VRPLNALGSA IAIFGTFLYS
401: QATAKKKKIE VGGDKKN

Arabidopsis Description

XPTXylulose 5-phosphate/phosphate translocator, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9LF61]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.