CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46103	Soybean	mitochondrion	98.48	98.23
Os07t0523600-01	Rice	plastid	60.91	87.27
Os07t0523965-01	Rice	plasma membrane	60.91	87.27
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	55.08	87.15
KRH14442	Soybean	plastid	80.46	80.25
VIT_19s0177g00300.t01	Wine grape	plastid	78.68	79.69
KRH73710	Soybean	plastid	78.68	78.48
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	12.44	77.78
KRH11399	Soybean	plastid	75.13	75.7
KRH20881	Soybean	plastid	75.13	75.7
GSMUA_Achr7P03380_001	Banana	plastid	75.13	75.32
GSMUA_Achr9P11730_001	Banana	plastid	74.62	73.32
Solyc03g031740.1.1	Tomato	plastid	69.54	71.92
TraesCS2A01G220400.1	Wheat	plastid	69.04	70.83
GSMUA_Achr8P07300_001	Banana	mitochondrion, plastid	78.17	70.8
TraesCS2B01G245900.1	Wheat	plastid	68.78	70.57
GSMUA_Achr4P33530_001	Banana	plastid	73.1	69.57
Zm00001d021653_P001	Maize	plastid	68.02	68.54
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	71.57	63.66
Zm00001d006511_P002	Maize	plastid	67.77	63.42
TraesCS2D01G226000.2	Wheat	plastid	68.53	60.95
HORVU2Hr1G045900.2	Barley	plastid	69.04	59.78
Os07t0523400-01	Rice	plasma membrane	35.53	49.3
KRH02096	Soybean	plastid	74.11	48.34
KRH75852	Soybean	cytosol, endoplasmic reticulum, plastid	39.34	43.79
KRH32944	Soybean	plastid	43.65	41.05
KRH13965	Soybean	plastid	43.4	40.91
KRH03277	Soybean	plastid	33.25	34.29
KRH63546	Soybean	endoplasmic reticulum, mitochondrion, plastid	32.74	32.58
KRG93252	Soybean	plastid	33.5	32.35
KRH54382	Soybean	endoplasmic reticulum, mitochondrion, plastid	33.25	32.27
KRH50117	Soybean	mitochondrion, plastid	33.25	32.27
KRH20388	Soybean	plastid	33.25	32.27

Protein Annotations

EntrezGene:100801832	MapMan:24.2.1.1.1	EMBL:ACUP02010924	EnsemblPlantsGene:GLYMA_18G102700	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857
GO:GO:0055085	UniProt:K7MR25	EnsemblPlants:KRG98852	ProteinID:KRG98852	ProteinID:KRG98852.1	ProteinID:KRG98853.1
PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF1	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817
TMHMM:TMhelix	InterPro:Tpt_PEP_transl	UniParc:UPI000233E2A7	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr18:+:10931521..10937268

Molecular Weight (calculated)

42677.4 Da

IEP (calculated)

9.996

GRAVY (calculated)

0.432

Length

394 amino acids

Sequence
(BLAST)

001: MISSLRQPVV GISGSDLLLR QRHATPIKAR SFLPSLSREK GQGSLVSVQK PLHIGASLGV GNFVSVKSDA KRGDLVKCEA YEADRSEVEG ASTPSEAAKK
101: VKIGIYFATW WALNVVFNIY NKKVLNAYPY PWLTSTLSLA CGSLMMLISW ATGIAEAPKT DPEFWKSLFP VAVAHTIGHV AATVSMSKVA VSFTHIIKSG
201: EPAFSVLVSR FLLGESFPVP VYLSLIPIIG GCALAAVTEL NFNMIGFMGA MISNLAFVFR NIFSKKGMKG KSVSGMNYYA CLSILSLAIL TPFAIAVEGP
301: QMWAAGWQTA MSQIGPQFIW WVAAQSVFYH LYNQVSYMSL DQISPLTFSI GNTMKRISVI VSSIIIFHTP VQPINALGAA IAILGTFLYS QAKQ

Best Arabidopsis Sequence Match ( AT5G54800.1 )
(BLAST)

001: MVLSVKQTLS PKIGLFRRNP SSSLGRSPVS LSFPSTELPK RTVLAVSKPL HLSSSLRAKS PVVRCEAYEA DRSEPHPIGD DAAAAETKSE AAKKLKIGIY
101: FATWWALNVV FNIYNKKVLN AYPYPWLTST LSLAAGSLMM LISWAVGIVE TPKTDFDFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFILGET FPTSVYLSLI PIIGGCALSA LTELNFNMIG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMLS LLILTPFAIA VEGPQMWVDG
301: WQTALATVGP QFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSVGNTMKR ISVIVSSIII FRTPVQPVNA LGAAIAILGT FLYSQAKL

Arabidopsis Description

GPT1GPT1 [Source:UniProtKB/TrEMBL;Acc:A0A178UL59]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.