CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 7
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os07t0523600-01	Rice	plastid	38.91	85.45
Os07t0523965-01	Rice	plasma membrane	38.91	85.45
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	34.44	83.53
KRH11399	Soybean	plastid	53.48	82.61
KRH20881	Soybean	plastid	53.48	82.61
Bra031772.1-P	Field mustard	plastid	44.37	78.13
CDY55220	Canola	plastid	49.67	77.52
CDY34641	Canola	plastid	45.86	76.31
Bra031393.1-P	Field mustard	plastid	49.5	76.28
CDY25324	Canola	plastid	49.17	75.19
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	7.78	74.6
KRG98852	Soybean	plastid	48.34	74.11
GSMUA_Achr7P03380_001	Banana	plastid	48.01	73.79
KRH46103	Soybean	mitochondrion	48.18	73.67
AT5G54800.1	Thale cress	plastid	47.19	73.45
CDY43022	Canola	plastid	47.02	72.82
Bra029005.1-P	Field mustard	plastid	47.02	72.82
CDY52572	Canola	plastid	46.85	72.56
KRH73710	Soybean	plastid	46.69	71.39
KRH14442	Soybean	plastid	46.69	71.39
TraesCS2A01G220400.1	Wheat	plastid	45.36	71.35
TraesCS2B01G245900.1	Wheat	plastid	45.2	71.09
GSMUA_Achr9P11730_001	Banana	plastid	47.02	70.82
AT1G61800.2	Thale cress	plastid	48.01	70.73
Solyc05g045670.2.1	Tomato	plastid	46.52	70.07
PGSC0003DMT400013500	Potato	plastid	46.36	69.83
PGSC0003DMT400065527	Potato	plastid	46.36	69.14
Zm00001d021653_P001	Maize	plastid	44.54	68.8
CDY19859	Canola	plastid	46.85	68.36
Bra002955.1-P	Field mustard	plastid	46.69	68.12
CDY17274	Canola	plastid	46.69	68.12
GSMUA_Achr8P07300_001	Banana	mitochondrion, plastid	49.01	68.05
GSMUA_Achr4P33530_001	Banana	plastid	45.86	66.91
Zm00001d006511_P002	Maize	plastid	45.36	65.08
Bra022745.1-P	Field mustard	plastid	48.34	64.89
CDY28750	Canola	plastid	48.34	64.89
CDY06630	Canola	plastid	48.51	64.82
AT4G03950.1	Thale cress	plasma membrane	29.3	63.9
TraesCS2D01G226000.2	Wheat	plastid	46.19	62.98
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	44.37	60.5
HORVU2Hr1G045900.2	Barley	plastid	45.53	60.44
Os07t0523400-01	Rice	plasma membrane	23.51	50.0
KRH75852	Soybean	cytosol, endoplasmic reticulum, plastid	26.66	45.48
KRH13965	Soybean	plastid	29.64	42.82
KRH32944	Soybean	plastid	29.47	42.48
KRH03277	Soybean	plastid	22.02	34.82
KRH63546	Soybean	endoplasmic reticulum, mitochondrion, plastid	21.69	33.08
KRH20388	Soybean	plastid	22.19	33.0
KRH50117	Soybean	mitochondrion, plastid	22.02	32.76
KRG93252	Soybean	plastid	22.02	32.6
KRH54382	Soybean	endoplasmic reticulum, mitochondrion, plastid	21.85	32.51

Protein Annotations

MapMan:24.2.1.1.1	Gene3D:3.20.20.80	UniProt:A0A0R0F6T6	EMBL:ACUP02010293	EnsemblPlantsGene:GLYMA_17G015500	GO:GO:0003674
GO:GO:0003824	GO:GO:0004553	GO:GO:0005215	GO:GO:0005575	GO:GO:0005975	GO:GO:0006810
GO:GO:0008150	GO:GO:0008152	GO:GO:0008422	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0022857	GO:GO:0055085	GO:GO:1901657	InterPro:Glyco_hydro_1	InterPro:Glycoside_hydrolase_SF	EnsemblPlants:KRH02096
ProteinID:KRH02096	ProteinID:KRH02096.1	PFAM:PF00232	PFAM:PF03151	PANTHER:PTHR43973	PANTHER:PTHR43973:SF1
SUPFAM:SSF103481	SUPFAM:SSF51445	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl
UniParc:UPI0006ED959B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr17:-:1156297..1165931

Molecular Weight (calculated)

67575.0 Da

IEP (calculated)

8.890

GRAVY (calculated)

0.194

Length

604 amino acids

Sequence
(BLAST)

001: MVSLVKYTAL PLTSPDSSSH VPRPQLCALP SVHNVQQSTQ PSLSSLKPLY ISSTQNFAFR RRRVPECQAY EADRSRPLEL NIELPDEEAG IEATQRIKIG
101: LYFATWWALN VVFNIYNKKV LNAFPYPWLT STLSLAAGSL MMLISWATKV AELPKVDFQF WKALFPVAVL HTIGHVAATV SMSKVAVSFT HIIKSAEPAF
201: SVLVSRFLLG EAFPGQVYLS LVPIIGGCAL AAVTELNFNM IGFMGAMISN LAFVLRNIFS KKGMKGMSVS GMNYYACLSI LSLLILTPFA IAVEGPKMWA
301: AGWQTALSEI GPNFVWWVAA QSVFYHLYNQ VSYMSLDQIS PLTFSIGNTM KRISVIVSSI LIFHTPIQPV NALGAAIAIL GTFLYSQVQF RSISDESNGD
401: VAVDQYHRYL QIKKCLIIGD RVKYWATFNE PNFLVPLGYR SAMAKCSEGD SEKEPFIAAH NVILSHAAAV DIHRTKCQWF EPMSNSTADK LATERARAFS
501: FNWFLDPIIF GKYPTEMENV LGSLLPKFSS HEKEKLKKGL DFIGLNYYTA FIFSFLQTPF SWFNIYIYPD GMEKAVTCVR DRYNNTPIFI TENVSSIKRS
601: NSID

Best Arabidopsis Sequence Match ( AT1G61800.2 )
(BLAST)

001: MLSSIKPSSS SFSTAISGSV RRSIPTKLKF SPLLIIKNCH NQSFNANVVS HQKPLHISSA SNFKREVKVE AYEADRSRPL DINIELPDEQ SAQKLKIGIY
101: FATWWALNVV FNIYNKKVLN AFPYPWLTST LSLACGSLMM LVSWATRIAD APKTDLEFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFFMGET FPLPVYLSLL PIIGGCALAA ITELNFNITG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMMS LVILTPFSIA VEGPQMWAAG
301: WQNAVSQVGP NFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSIGNTMKR ISVIVASIII FHTPIQPVNA LGAAIAIFGT FLYSQVNKQT YSCLPTSSTW
401: FFSEQFLVLI

Arabidopsis Description

GPT2glucose-6-phosphate/phosphate translocator 2 [Source:TAIR;Acc:AT1G61800]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.