CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra031772.1-P	Field mustard	plastid	92.29	97.67
Os07t0523965-01	Rice	plasma membrane	65.84	86.91
Os07t0523600-01	Rice	plastid	65.84	86.91
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	59.23	86.35
CDY55220	Canola	plastid	84.02	78.81
CDY25324	Canola	plastid	84.57	77.72
KRH20881	Soybean	plastid	78.79	73.15
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	12.67	73.02
KRH11399	Soybean	plastid	78.51	72.89
TraesCS2B01G245900.1	Wheat	plastid	74.38	70.31
TraesCS2A01G220400.1	Wheat	plastid	74.38	70.31
GSMUA_Achr7P03380_001	Banana	plastid	75.48	69.72
CDY52572	Canola	plastid	74.1	68.97
GSMUA_Achr9P11730_001	Banana	plastid	75.76	68.58
CDY43022	Canola	plastid	73.28	68.21
Solyc05g045670.2.1	Tomato	plastid	75.21	68.08
PGSC0003DMT400013500	Potato	plastid	75.21	68.08
Zm00001d021653_P001	Maize	plastid	72.45	67.26
AT4G03950.1	Thale cress	plasma membrane	50.96	66.79
PGSC0003DMT400065527	Potato	plastid	74.1	66.42
CDY19859	Canola	plastid	73.83	64.73
CDY17274	Canola	plastid	73.55	64.49
GSMUA_Achr8P07300_001	Banana	mitochondrion, plastid	76.86	64.14
GSMUA_Achr4P33530_001	Banana	plastid	73.0	64.01
Zm00001d006511_P002	Maize	plastid	72.18	62.23
TraesCS2D01G226000.2	Wheat	plastid	74.38	60.95
CDY28750	Canola	plastid	75.21	60.67
CDY06630	Canola	plastid	74.93	60.18
HORVU2Hr1G045900.2	Barley	plastid	74.66	59.56
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	69.97	57.34
Os07t0523400-01	Rice	plasma membrane	38.29	48.94
KRH02096	Soybean	plastid	76.31	45.86
CDY38448	Canola	plastid	45.45	41.04
CDY16905	Canola	plastid	45.18	40.9
CDY33455	Canola	plastid	36.91	32.92
CDX77632	Canola	plastid	36.91	32.52
CDY48790	Canola	mitochondrion	35.54	32.01
CDY12390	Canola	plastid	34.99	31.59
CDY47555	Canola	plastid	34.99	31.2
CDX74305	Canola	plastid	32.51	30.89
CDX91942	Canola	plastid	32.51	30.81
CDY04362	Canola	plastid	19.83	30.13
CDY53419	Canola	mitochondrion	36.09	25.49

Protein Annotations

MapMan:24.2.1.1.1	GO:A0A078HAB2	UniProt:A0A078HAB2	EnsemblPlants:CDY34641	ProteinID:CDY34641	ProteinID:CDY34641.1
GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00057098001	PFAM:PF03151	PANTHER:PTHR43973
PANTHER:PTHR43973:SF1	SUPFAM:SSF103481	InterPro:Sugar_P_trans_dom	TIGRFAMs:TIGR00817	TMHMM:TMhelix	InterPro:Tpt_PEP_transl
UniParc:UPI0004EE9253	SEG:seg	:	:	:	:

Description

BnaC08g42000DBnaC08g42000D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HAB2]

Coordinates

chrLK032338:-:182118..184481

Molecular Weight (calculated)

39584.0 Da

IEP (calculated)

9.986

GRAVY (calculated)

0.566

Length

363 amino acids

Sequence
(BLAST)

001: MISSIKPVSS SLTAIAAVRR TVSPKLRVGA YEADRSQPID VGVEAPGEQS GQKVKIGIYF ATWWALNVVF NIYNKKVLNA FPYPWLTSTL SLACGSLMML
101: VSWVTRVAEA PKTDLDFWKT LFPVAVAHTI GHVAATVSMS KVAVSFTHII KSGEPAFSVL VSRLFLGETF PLPVYLSLLP IIGGCALAAV TELNFNMIGF
201: MGAMISNLAF VFRNIFSKKG MKGKSVSGMN YYACLSMMSL LLVTPFAIAV EGPQMWAAGW QNAVSEIGPN FVWWVVAQSV FYHLYNQVSY MSLDQITPLT
301: FSVGNTMKRI SVIVASIIIF HTPIRPVNGL GAAIAILGTF IYSQVKQNKG LKLIVQCCTA FHV

Best Arabidopsis Sequence Match ( AT1G61800.1 )
(BLAST)

001: MLSSIKPSSS SFSTAISGSV RRSIPTKLKF SPLLIIKNCH NQSFNANVVS HQKPLHISSA SNFKREVKVE AYEADRSRPL DINIELPDEQ SAQKLKIGIY
101: FATWWALNVV FNIYNKKVLN AFPYPWLTST LSLACGSLMM LVSWATRIAD APKTDLEFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFFMGET FPLPVYLSLL PIIGGCALAA ITELNFNITG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMMS LVILTPFSIA VEGPQMWAAG
301: WQNAVSQVGP NFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSIGNTMKR ISVIVASIII FHTPIQPVNA LGAAIAIFGT FLYSQAKQ

Arabidopsis Description

GPT2glucose-6-phosphate/phosphate translocator 2 [Source:TAIR;Acc:AT1G61800]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.