Factsheet for Solyc05g045670.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

plastid: 20363867

msms PMID: 20363867 doi

C Barsan, P Sanchez-Bel, C Rombaldi, I Egea, M Rossignol, M Kuntz, M Zouine, A Latché, M Bouzayen, JC Pech

Université de Toulouse, INP-ENSA Toulouse, Génomique et Biotechnologie des Fruits, Avenue de l'Agrobiopole BP 32607, F-31326 Castanet-Tolosan, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400013500	Potato	plastid	97.26	97.26
Os07t0523600-01	Rice	plastid	59.35	86.55
Os07t0523965-01	Rice	plasma membrane	59.35	86.55
OQU90029	Sorghum	cytosol, plasma membrane, vacuole	53.12	85.54
Bra031772.1-P	Field mustard	plastid	66.58	77.84
GSMUA_Achr10P...	Banana	endoplasmic reticulum, extracellular	11.97	76.19
CDY34641	Canola	plastid	68.08	75.21
CDY55220	Canola	plastid	72.07	74.68
KRH20881	Soybean	plastid	71.82	73.66
Bra031393.1-P	Field mustard	plastid	71.82	73.47
KRH11399	Soybean	plastid	71.57	73.4
GSMUA_Achr7P03380_001	Banana	plastid	71.57	73.03
Solyc03g031740.1.1	Tomato	plastid	68.33	71.92
CDY25324	Canola	plastid	70.82	71.9
TraesCS2A01G220400.1	Wheat	plastid	67.83	70.83
TraesCS2B01G245900.1	Wheat	plastid	67.83	70.83
GSMUA_Achr9P11730_001	Banana	plastid	70.57	70.57
Solyc07g064270.2.1	Tomato	plastid	69.33	70.38
AT1G61800.2	Thale cress	plastid	71.07	69.51
Zm00001d021653_P001	Maize	plastid	66.33	68.03
GSMUA_Achr4P33530_001	Banana	plastid	69.08	66.91
GSMUA_Achr8P07300_001	Banana	mitochondrion, plastid	71.82	66.21
AT4G03950.1	Thale cress	plasma membrane	43.64	63.18
Zm00001d006511_P002	Maize	plastid	65.84	62.71
TraesCS2D01G226000.2	Wheat	plastid	67.33	60.95
HORVU2Hr1G045900.2	Barley	plastid	67.83	59.78
GSMUA_Achr10P...	Banana	cytosol, plasma membrane, plastid	65.59	59.37
Solyc07g052450.1.1	Tomato	plastid	28.68	57.21
Os07t0523400-01	Rice	plasma membrane	35.16	49.65
KRH02096	Soybean	plastid	70.07	46.52
Solyc01g081390.2.1	Tomato	plastid	41.15	39.1
Solyc01g010350.2.1	Tomato	plastid	33.67	32.93
Solyc02g086650.2.1	Tomato	plastid	32.17	32.49
Solyc10g008980.2.1	Tomato	plastid	33.42	32.29
Solyc03g112870.2.1	Tomato	plastid	32.42	31.71

Protein Annotations

EnsemblPlants:Solyc05g045670.2.1	EnsemblPlantsGene:Solyc05g045670.2	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0022857	GO:GO:0055085	InterPro:Sugar_P_trans_dom
InterPro:Tpt_PEP_transl	PANTHER:PTHR43973	PANTHER:PTHR43973:SF1	PFAM:PF03151	SEG:seg	TIGRFAMs:TIGR00817
TMHMM:TMhelix	UniParc:UPI00027668CA	UniProt:K4C0Q1	MapMan:24.2.1.1.1	:	:

Description

No Description!

Coordinates

chr5:+:57423059..57426317

Molecular Weight (calculated)

44068.0 Da

IEP (calculated)

9.623

GRAVY (calculated)

0.402

Length

401 amino acids

Sequence
(BLAST)

001: MAFSAGQSYA FSTNFDPLQQ NLWGCKPHIS SFSLKDINFK QCDKPNILSK KPLYISAVLS GFGHADESKE FKSRDPLVQC NAYEASRPQS IPINIEFGQE
101: AQAAATQKLK IGLYFATWWA LNVVFNIYNK KVLNAFPFPW LTSTLSLAAG SLMMLVSWAT KIAETPKTDF DFWKALFPVA VAHTIGHVAA TVSMSKVAVS
201: FTHIIKSGEP AFSVLVSRLL GETFPLPVYL SLLPIIGGCG LAAITELNFN LIGFMGAMIS NLAFVFRNIF SKKGMKGKSV GGMNYYACLS MMSLLILTPF
301: AIAVEGPQVW ALGWQNAVTQ IGPNFIWWVV AQSVFYHLYN QVSYMSLNEI SPLTFSIGNT MKRISVIVSS IIIFQIPIQP INALGAAIAI LGTFLYSQAK
401: Q

Best Arabidopsis Sequence Match ( AT1G61800.1 )
(BLAST)

001: MLSSIKPSSS SFSTAISGSV RRSIPTKLKF SPLLIIKNCH NQSFNANVVS HQKPLHISSA SNFKREVKVE AYEADRSRPL DINIELPDEQ SAQKLKIGIY
101: FATWWALNVV FNIYNKKVLN AFPYPWLTST LSLACGSLMM LVSWATRIAD APKTDLEFWK TLFPVAVAHT IGHVAATVSM SKVAVSFTHI IKSGEPAFSV
201: LVSRFFMGET FPLPVYLSLL PIIGGCALAA ITELNFNITG FMGAMISNLA FVFRNIFSKK GMKGKSVSGM NYYACLSMMS LVILTPFSIA VEGPQMWAAG
301: WQNAVSQVGP NFVWWVVAQS VFYHLYNQVS YMSLDQISPL TFSIGNTMKR ISVIVASIII FHTPIQPVNA LGAAIAIFGT FLYSQAKQ

Arabidopsis Description

GPT2glucose-6-phosphate/phosphate translocator 2 [Source:TAIR;Acc:AT1G61800]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.